RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ABHD4Q8TB40 342 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 GHSRQ92847 366 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 MRPL38Q96DV4 380 aaKnown RBP17.75■□□□□ 0.43
COL27A1-207ENST00000494090 DUS3LQ96G46 650 aaKnown RBP17.75■□□□□ 0.43
COL27A1-207ENST00000494090 SEMA4GQ9NTN9 838 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 KIF13AQ9H1H9 1805 aa17.75■□□□□ 0.43
COL27A1-207ENST00000494090 GPR171O14626 319 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 ERV3-1Q14264 604 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 SFXN4Q6P4A7 337 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 OR51D1Q8NGF3 324 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 TAAR8Q969N4 342 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 ALG12Q9BV10 488 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 PGAP2Q9UHJ9 254 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 TNFRSF10CO14798 259 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 MSR1P21757 451 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 CSNK1EP49674 416 aaKnown RBP17.74■□□□□ 0.43
COL27A1-207ENST00000494090 SLC48A1Q6P1K1 146 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 FAM111BQ6SJ93 734 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 OR6T1Q8NGN1 323 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 OR14A2Q96R54 314 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 PIGQQ9BRB3 760 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 SULT1C2O00338 296 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 TOR1AO14656 332 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 OR8G3PP0DMU2 310 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 TACR3P29371 465 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 KIAA1024LP59773 190 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 ADPRMQ3LIE5 342 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 CD163Q86VB7 1156 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 BPIFB2Q8N4F0 458 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 LILRB4Q8NHJ6 448 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 MKRN2Q9H000 416 aaKnown RBP17.74■□□□□ 0.43
COL27A1-207ENST00000494090 LIPAP38571 399 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 RBMS2Q15434 407 aaKnown RBP17.74■□□□□ 0.43
COL27A1-207ENST00000494090 OTUD1Q5VV17 481 aaPredicted RBP17.74■□□□□ 0.43
COL27A1-207ENST00000494090 NDUFAF7Q7L592 441 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 SSX3Q99909 188 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 CMSS1Q9BQ75 279 aaKnown RBP17.74■□□□□ 0.43
COL27A1-207ENST00000494090 CDC14CA4D256 554 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 OR6C6A6NF89 314 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 SERPINA2P20848 420 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 FOXK2Q01167 660 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 FAM57BQ71RH2 274 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 GDF7Q7Z4P5 450 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 OR4N2Q8NGD1 307 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 CA5BQ9Y2D0 317 aa17.74■□□□□ 0.43
COL27A1-207ENST00000494090 TRDV1A0A1B0GX56 115 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 UBL3O95164 117 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 SLC34A2O95436 690 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 UBBP0CG47 229 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 UBCP0CG48 685 aaKnown RBP17.73■□□□□ 0.43
COL27A1-207ENST00000494090 PSMB1P20618 241 aaKnown RBP17.73■□□□□ 0.43
COL27A1-207ENST00000494090 NFYAP23511 347 aaPredicted RBP17.73■□□□□ 0.43
COL27A1-207ENST00000494090 SSTR2P30874 369 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 ALDH3B1P43353 468 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 RPS27AP62979 156 aaKnown RBP17.73■□□□□ 0.43
COL27A1-207ENST00000494090 UBA52P62987 128 aaKnown RBP17.73■□□□□ 0.43
COL27A1-207ENST00000494090 ZNF576Q9H609 170 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 FGF21Q9NSA1 209 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 CBX7O95931 251 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 CD27P26842 260 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 ISL1P61371 349 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 ZNF585AQ6P3V2 769 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 OR52N1Q8NH53 320 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 SNX18Q96RF0 628 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 PRDM9Q9NQV7 894 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 PPT2Q9UMR5 302 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 ANKRD36CQ5JPF3 1778 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 CTNSO60931 367 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 SHC1P29353 583 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 CSNK1G2P78368 415 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 FRMD1Q8N878 549 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 IL1F10Q8WWZ1 152 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 OR6C1Q96RD1 312 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 C1QTNF3Q9BXJ4 246 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 NOSIPQ9Y314 301 aaKnown RBP17.73■□□□□ 0.43
COL27A1-207ENST00000494090 GDNFP39905 211 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 ESCO2Q56NI9 601 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 RDH10Q8IZV5 341 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 FOXN4Q96NZ1 517 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 UGT2A1Q9Y4X1 527 aa17.73■□□□□ 0.43
COL27A1-207ENST00000494090 ARGFXA6NJG6 315 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 ACOD1A6NK06 481 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 ZNF195O14628 629 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 HLA-AP01891 365 aaKnown RBP17.72■□□□□ 0.43
COL27A1-207ENST00000494090 YOD1Q5VVQ6 348 aaPredicted RBP17.72■□□□□ 0.43
COL27A1-207ENST00000494090 ABHD17CQ6PCB6 329 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 PAPD4Q6PIY7 484 aaKnown RBP17.72■□□□□ 0.43
COL27A1-207ENST00000494090 SPPL3Q8TCT6 385 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 WFDC5Q8TCV5 224 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 SLC6A18Q96N87 628 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 C19orf12Q9NSK7 152 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 ZNF593O00488 134 aaPredicted RBP17.72■□□□□ 0.43
COL27A1-207ENST00000494090 TCN2P20062 427 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 CLDN17P56750 224 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 CCSMST1Q4G0I0 132 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 AFMIDQ63HM1 303 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 LACC1Q8IV20 430 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 ACBD4Q8NC06 268 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 SGK3Q96BR1 496 aa17.72■□□□□ 0.43
COL27A1-207ENST00000494090 FCRL1Q96LA6 429 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms