RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 PRORSD1PA6NEY8 169 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 AIM2O14862 343 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 TPST2O60704 377 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 SERPINB7O75635 380 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 ARAFP10398 606 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 HOXB1P14653 301 aaPredicted RBP11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 SLC25A16P16260 332 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 SELENOPP49908 381 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 SH3BGRP55822 239 aaPredicted RBP11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 CLDN17P56750 224 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 ADRM1Q16186 407 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 TBRG1Q3YBR2 411 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 HIKESHIQ53FT3 197 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 ANKRD16Q6P6B7 361 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 NET1Q7Z628 596 aaPredicted RBP11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 EPHX4Q8IUS5 362 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 BHLHE22Q8NFJ8 381 aaPredicted RBP11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 OR1K1Q8NGR3 316 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 DNAJA4Q8WW22 397 aaPredicted RBP11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 SLC38A4Q969I6 547 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 SPDL1Q96EA4 605 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 BOD1Q96IK1 185 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 SLC38A2Q96QD8 506 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 CCDC28BQ9BUN5 200 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 LINC00470Q9BZP3 86 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 NELFAQ9H3P2 528 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 RABEP2Q9H5N1 569 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 ZNF385DQ9H6B1 395 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 B3GAT1Q9P2W7 334 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 ADAM21Q9UKJ8 722 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 MOKQ9UQ07 419 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 FKBP7Q9Y680 259 aa11.7□□□□□ -0.54
CTDSP1-212ENST00000494067 A0A096LNT2 108 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 A8MV72 311 aaPredicted RBP11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 KIAA1324LA8MWY0 1029 aaPredicted RBP11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 ATP6V1G2-DDX39BF2Z307 99 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 FZD7O75084 574 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 SLC43A1O75387 559 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 LGI1O95970 557 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 VIMP08670 466 aaKnown RBP11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 SLC6A2P23975 617 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 EFNA4P52798 201 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 SNRPD2P62316 118 aaKnown RBP11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 CDK6Q00534 326 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 ROR2Q01974 943 aaKnown RBP11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 SELPLGQ14242 412 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 MFSD13AQ14CX5 517 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 ALG10BQ5I7T1 473 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 FAM69AQ5T7M9 428 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 REEP3Q6NUK4 255 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 PODNL1Q6PEZ8 512 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 ULK3Q6PHR2 472 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 DLEU7Q6UYE1 221 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 GPR137CQ8N3F9 429 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 LSMEM1Q8N8F7 131 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 ANKK1Q8NFD2 765 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 OR10H5Q8NGA6 315 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 MAGEE2Q8TD90 523 aaPredicted RBP11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 SLC47A1Q96FL8 570 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 OXGR1Q96P68 337 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 ALKBH3Q96Q83 286 aaPredicted RBP11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 EPYCQ99645 322 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 CPPED1Q9BRF8 314 aaPredicted RBP11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 KATNB1Q9BVA0 655 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 EVA1AQ9H8M9 152 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 SEC61A2Q9H9S3 476 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 TMEM27Q9HBJ8 222 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 FBXO9Q9UK97 447 aaPredicted RBP11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 RCE1Q9Y256 329 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 GMEB1Q9Y692 573 aa11.69□□□□□ -0.54
CTDSP1-212ENST00000494067 IGHV4-30-2A0A087WSY4 118 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 ARPC4-TTLL3A0A0A6YYG9 625 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 A0A1B0GWA3 101 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 UPK3AO75631 287 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 ERCC1P07992 297 aaPredicted RBP11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 NQO1P15559 274 aaKnown RBP11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 TUBA1BP68363 451 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 TUBA4AP68366 448 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 C3orf36Q3SXR2 165 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 AGKQ53H12 422 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 DHRS4L2Q6PKH6 230 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 C6orf89Q6UWU4 347 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 TUBA1AQ71U36 451 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 MYPOPQ86VE0 399 aaPredicted RBP11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 RETREG3Q86VR2 466 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 PIK3C3Q8NEB9 887 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 PROX1Q92786 737 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 TAAR8Q969N4 342 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 FBXO17Q96EF6 278 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 ZNF837Q96EG3 531 aaPredicted RBP11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 TNFRSF13CQ96RJ3 184 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 ASPNQ9BXN1 380 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 TESQ9UGI8 421 aaKnown RBP11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 ANGPT4Q9Y264 503 aa11.68□□□□□ -0.54
CTDSP1-212ENST00000494067 TLN2Q9Y4G6 2542 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 TRAV36DV7A0A075B6V5 113 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 A0A096LPE4 126 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 IGHV1-18A0A0C4DH31 117 aa11.67□□□□□ -0.54
CTDSP1-212ENST00000494067 A0A1W2PPZ6 126 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms