RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 GLI4P10075 376 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 ZNF708P17019 499 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 FPR3P25089 353 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 GRPRP30550 384 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 DIO1P49895 249 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 DAPP51397 102 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 CLDN18P56856 261 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 CARD18P57730 90 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 SLC35A1P78382 337 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 LTBQ06643 244 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 TSPAN31Q12999 210 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 DAG1Q14118 895 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 MFSD13AQ14CX5 517 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 BCL2A1Q16548 175 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 OGFRL1Q5TC84 451 aaPredicted RBP12.01□□□□□ -0.49
MSH6-208ENST00000493177 ZNF770Q6IQ21 691 aaPredicted RBP12.01□□□□□ -0.49
MSH6-208ENST00000493177 TMPRSS11FQ6ZWK6 438 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 SLC46A3Q7Z3Q1 461 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 GALNT5Q7Z7M9 940 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 OR13C2Q8NGS9 318 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 OR6S1Q8NH40 331 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 OR10D3Q8NH80 312 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 MFSD8Q8NHS3 518 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 OSTF1Q92882 214 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 ZHX1-C8orf76Q96EF9 292 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 WDYHV1Q96HA8 205 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 MOGAT1Q96PD6 335 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 TRIB1Q96RU8 372 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 NIPSNAP1Q9BPW8 284 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 PSD2Q9BQI7 771 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 DGCR6LQ9BY27 220 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 UCK2Q9BZX2 261 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 VCXQ9H320 206 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 VCX3BQ9H321 246 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 FKRPQ9H9S5 495 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 TIGARQ9NQ88 270 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 KRT84Q9NSB2 600 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 ZNF229Q9UJW7 825 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 FAM215AQ9Y5M1 114 aa12.01□□□□□ -0.49
MSH6-208ENST00000493177 TRAV27A0A087WT01 109 aa12□□□□□ -0.49
MSH6-208ENST00000493177 A0A0G2JNJ9 132 aa12□□□□□ -0.49
MSH6-208ENST00000493177 AHRRA9YTQ3 701 aa12□□□□□ -0.49
MSH6-208ENST00000493177 M0R082 166 aa12□□□□□ -0.49
MSH6-208ENST00000493177 OR6A2O95222 327 aa12□□□□□ -0.49
MSH6-208ENST00000493177 IL2RAP01589 272 aa12□□□□□ -0.49
MSH6-208ENST00000493177 GSTM3P21266 225 aa12□□□□□ -0.49
MSH6-208ENST00000493177 IGFBP5P24593 272 aa12□□□□□ -0.49
MSH6-208ENST00000493177 GSSP48637 474 aa12□□□□□ -0.49
MSH6-208ENST00000493177 ALDH3A2P51648 485 aa12□□□□□ -0.49
MSH6-208ENST00000493177 CLDN15P56746 228 aa12□□□□□ -0.49
MSH6-208ENST00000493177 PMS2P3Q13401 168 aa12□□□□□ -0.49
MSH6-208ENST00000493177 TAF11Q15544 211 aa12□□□□□ -0.49
MSH6-208ENST00000493177 CTU2Q2VPK5 515 aaKnown RBP12□□□□□ -0.49
MSH6-208ENST00000493177 RTL6Q6ICC9 239 aa12□□□□□ -0.49
MSH6-208ENST00000493177 FAHD1Q6P587 224 aa12□□□□□ -0.49
MSH6-208ENST00000493177 NANOGNBQ7Z5D8 188 aa12□□□□□ -0.49
MSH6-208ENST00000493177 OAFQ86UD1 273 aa12□□□□□ -0.49
MSH6-208ENST00000493177 LRRC17Q8N6Y2 441 aa12□□□□□ -0.49
MSH6-208ENST00000493177 OR51A7Q8NH64 312 aa12□□□□□ -0.49
MSH6-208ENST00000493177 LILRB4Q8NHJ6 448 aa12□□□□□ -0.49
MSH6-208ENST00000493177 ZNF417Q8TAU3 575 aa12□□□□□ -0.49
MSH6-208ENST00000493177 NRG4Q8WWG1 115 aa12□□□□□ -0.49
MSH6-208ENST00000493177 LRRC46Q96FV0 321 aa12□□□□□ -0.49
MSH6-208ENST00000493177 ADGRG7Q96K78 797 aa12□□□□□ -0.49
MSH6-208ENST00000493177 ZNF587Q96SQ5 575 aaPredicted RBP12□□□□□ -0.49
MSH6-208ENST00000493177 GPA33Q99795 319 aa12□□□□□ -0.49
MSH6-208ENST00000493177 SLC29A1Q99808 456 aa12□□□□□ -0.49
MSH6-208ENST00000493177 NAA11Q9BSU3 229 aaPredicted RBP12□□□□□ -0.49
MSH6-208ENST00000493177 OSBPL10Q9BXB5 764 aa12□□□□□ -0.49
MSH6-208ENST00000493177 PAPOLBQ9NRJ5 636 aaKnown RBP12□□□□□ -0.49
MSH6-208ENST00000493177 Q9UFV3 132 aa12□□□□□ -0.49
MSH6-208ENST00000493177 TRAPPC4Q9Y296 219 aa12□□□□□ -0.49
MSH6-208ENST00000493177 POFUT2Q9Y2G5 429 aa12□□□□□ -0.49
MSH6-208ENST00000493177 CORINQ9Y5Q5 1042 aa12□□□□□ -0.49
MSH6-208ENST00000493177 MED12Q93074 2177 aa12□□□□□ -0.49
MSH6-208ENST00000493177 IGHV3-15A0A0B4J1V0 119 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 HSPB2A8KAH6 182 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 FTCDNL1E5RQL4 147 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 BLOC1S5-TXNDC5H3BN57 136 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 H3BN98 237 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 CDC42EP2O14613 210 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 MITFO75030 526 aaPredicted RBP11.99□□□□□ -0.49
MSH6-208ENST00000493177 AKR7A3O95154 331 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 SYNGR4O95473 234 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 HPRP00739 348 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 CPN1P15169 458 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 ENPP1P22413 925 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 POU1F1P28069 291 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 PTDSS1P48651 473 aaKnown RBP11.99□□□□□ -0.49
MSH6-208ENST00000493177 SLC9A3P48764 834 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 RAC3P60763 192 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 PPP2R2BQ00005 443 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 HSPB2Q16082 182 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 RIPPLY2Q5TAB7 128 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 OR5J2Q8NH18 312 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 FANK1Q8TC84 345 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 DNAJC9Q8WXX5 260 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 ZNF845Q96IR2 970 aaPredicted RBP11.99□□□□□ -0.49
MSH6-208ENST00000493177 TNFRSF13CQ96RJ3 184 aa11.99□□□□□ -0.49
MSH6-208ENST00000493177 SRXN1Q9BYN0 137 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms