RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	WDR91	A4D1P6	747 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	FTCDNL1	E5RQL4	147 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161		E9PBE3	544 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	RPL36A-HNRNPH2	H7BZ11	118 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	VAMP5	O95183	116 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	ERCC1	P07992	297 aa	Predicted RBP	11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	TFPT	P0C1Z6	253 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	PNMT	P11086	282 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	UQCRB	P14927	111 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	TCN1	P20061	433 aa	Predicted RBP	11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	UFM1	P61960	85 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	EGR4	Q05215	589 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	SNTB2	Q13425	540 aa	Known RBP	11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	DAG1	Q14118	895 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	PHYHD1	Q5SRE7	291 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	ATG16L1	Q676U5	607 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	WBP2NL	Q6ICG8	309 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	THSD4	Q6ZMP0	1018 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	ZNF621	Q6ZSS3	439 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	PIP4P2	Q8N4L2	257 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	OR52P1P	Q8NH57	321 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	CLDND2	Q8NHS1	167 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	MS4A3	Q96HJ5	214 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	ANKRD27	Q96NW4	1050 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	ZIM3	Q96PE6	472 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	ZNF317	Q96PQ6	595 aa	Predicted RBP	11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	MRPL37	Q9BZE1	423 aa	Known RBP	11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	NOX3	Q9HBY0	568 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	CRLF2	Q9HC73	371 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	GPR35	Q9HC97	309 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	HIF1AN	Q9NWT6	349 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	B3GAT1	Q9P2W7	334 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	LGALS13	Q9UHV8	139 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	RASD1	Q9Y272	281 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161	PCDHB14	Q9Y5E9	798 aa		11.8	□□□□□ -0.52
SAMM50-204	ENST00000493161		B4DSR2	109 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	TYROBP	O43914	113 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	HPX	P02790	462 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	ALDOC	P09972	364 aa	Known RBP	11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	HOXB1	P14653	301 aa	Predicted RBP	11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	PAX7	P23759	505 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	RPS5	P46782	204 aa	Known RBP	11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	MVD	P53602	400 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	SEC24C	P53992	1094 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	SH3BGR	P55822	239 aa	Predicted RBP	11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	HOXC5	Q00444	222 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	GNA13	Q14344	377 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	CEACAM16	Q2WEN9	425 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	DEF8	Q6ZN54	512 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	SERPINA11	Q86U17	422 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	GLCCI1	Q86VQ1	547 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	LRP11	Q86VZ4	500 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	NUDCD3	Q8IVD9	361 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	PEX5L	Q8IYB4	626 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	ZNF440	Q8IYI8	595 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	EIF1AD	Q8N9N8	165 aa	Known RBP	11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	KIF18A	Q8NI77	898 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	KTI12	Q96EK9	354 aa	Predicted RBP	11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	PANX1	Q96RD7	426 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	SORT1	Q99523	831 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	NUF2	Q9BZD4	464 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	TREM2	Q9NZC2	230 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	FBXO9	Q9UK97	447 aa	Predicted RBP	11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	ZNF443	Q9Y2A4	671 aa	Predicted RBP	11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	DSPP	Q9NZW4	1301 aa		11.79	□□□□□ -0.52
SAMM50-204	ENST00000493161	VSTM5	A8MXK1	200 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	AHSA1	O95433	338 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	HLA-H	P01893	362 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	ETFA	P13804	333 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	NCF2	P19878	526 aa	Predicted RBP	11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	NR4A1	P22736	598 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	ARR3	P36575	388 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	ALDH3B1	P43353	468 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	CAPZA2	P47755	286 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	CLNS1A	P54105	237 aa	Known RBP	11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	ABCE1	P61221	599 aa	Known RBP	11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	COPZ1	P61923	177 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	ACTG1	P63261	375 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	CHI3L2	Q15782	390 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	LIN52	Q52LA3	116 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	C1orf229	Q6ZS94	237 aa	Predicted RBP	11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	WDFY1	Q8IWB7	410 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	MFSD8	Q8NHS3	518 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	ZFAND2B	Q8WV99	257 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	YIPF5	Q969M3	257 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	MRPL24	Q96A35	216 aa	Known RBP	11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	TMEM186	Q96B77	213 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	OR2M2	Q96R28	347 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	OR52E6	Q96RD3	313 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	SYT3	Q9BQG1	590 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	RACGAP1	Q9H0H5	632 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	B3GNT2	Q9NY97	397 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	MYEF2	Q9P2K5	600 aa	Known RBP	11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	REV1	Q9UBZ9	1251 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	FZR1	Q9UM11	496 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	RCE1	Q9Y256	329 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	CMAHP	Q9Y471	501 aa		11.78	□□□□□ -0.52
SAMM50-204	ENST00000493161	SPEF1	Q9Y4P9	236 aa		11.78	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms