RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 BTNL2Q9UIR0 455 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 KCNIP3Q9Y2W7 256 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 PEX16Q9Y5Y5 336 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 NPTNQ9Y639 398 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 CDH10Q9Y6N8 788 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 V9GY05 133 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 SCN2AQ99250 2005 aa1.9□□□□□ -2.11
HMGB1P30-201ENST00000492455 PLEKHG1Q9ULL1 1385 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 PLEKHH1Q9ULM0 1364 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 PPIAL4EA0A075B759 164 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 A6NIZ1 184 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 OR5B21A6NL26 309 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 CCDC169A6NNP5 214 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 E9PBE3 544 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 PPIAL4FP0DN26 164 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 ATP6V1B2P21281 511 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 CXCR2P25025 360 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 CD1BP29016 333 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 IL12AP29459 219 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 DRD3P35462 400 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 KIR2DS4P43632 304 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 SUCLG1P53597 346 aaKnown RBP1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 ATP5IP56385 69 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 WNT4P56705 351 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 RAP1BP61224 184 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 SELENOTP62341 195 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 TGFBR3Q03167 851 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 MRPL28Q13084 256 aaKnown RBP1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 EIF4EBP2Q13542 120 aaPredicted RBP1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 OR5I1Q13606 314 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 GPNMBQ14956 572 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 ZNF77Q15935 545 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 SSX2Q16385 188 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 MICBQ29980 383 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 C1orf100Q5SVJ3 147 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 TIGD3Q6B0B8 471 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 CTRB2Q6GPI1 263 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 HSDL2Q6YN16 418 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 ACP7Q6ZNF0 438 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 RNF165Q6ZSG1 346 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 Q6ZVH6 145 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 FAM228AQ86W67 206 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 SLC26A11Q86WA9 606 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 ECHDC2Q86YB7 292 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 NUDCD3Q8IVD9 361 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 SUMF2Q8NBJ7 301 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 SDR9C7Q8NEX9 313 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 OR9K2Q8NGE7 335 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 OR51S1Q8NGJ8 323 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 OR1L6Q8NGR2 347 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 RNF138Q8WVD3 245 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 MYDGFQ969H8 173 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 CMTM7Q96FZ5 175 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 ITCHQ96J02 903 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 PANX2Q96RD6 677 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 FMO2Q99518 471 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 TSG101Q99816 390 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 PPA2Q9H2U2 334 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 NT5MQ9NPB1 228 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 MMP26Q9NRE1 261 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 AIG1Q9NVV5 245 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 RPS6KB2Q9UBS0 482 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 NEU3Q9UQ49 428 aa1.89□□□□□ -2.11
HMGB1P30-201ENST00000492455 MTCL1Q9Y4B5 1905 aaKnown RBP1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 NACAE9PAV3 2078 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 COL4A4P53420 1690 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 NSG1A0A0A6YYJ2 146 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 KIR2DL5BA0A0G2JN68 375 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 KIR2DL5BA0A0G2JPC4 375 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 FAM47DPA6NHR8 397 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 ZNF716A6NP11 495 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 A8MUA0 341 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 H0Y9J4 135 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 ABCD4O14678 606 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 FAM189A1O60320 539 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 HMMRO75330 724 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 UPK3AO75631 287 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 NDUFB10O96000 172 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 KLK3P07288 261 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 ZNF735P0CB33 412 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 GABRR1P24046 479 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 HTR1EP28566 365 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 CD1CP29017 333 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 GDI1P31150 447 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 CRYBB2P43320 205 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 YAP1P46937 504 aaKnown RBP1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 GSSP48637 474 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 GPM6AP51674 278 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 KPNA2P52292 529 aaKnown RBP1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 DLX1P56177 255 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 SCRN3Q0VDG4 424 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 BST2Q10589 180 aaKnown RBP1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 PPIL2Q13356 520 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 ORC2Q13416 577 aaPredicted RBP1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 GNMTQ14749 295 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 Q6ZN92 141 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 UTS2BQ765I0 119 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 NANOGNBQ7Z5D8 188 aa1.88□□□□□ -2.11
HMGB1P30-201ENST00000492455 RALGPS2Q86X27 583 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms