RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	GTDC1	Q4AE62	458 aa		13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	C6orf10	Q5SRN2	563 aa		13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	NIPAL3	Q6P499	406 aa		13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	BLOC1S3	Q6QNY0	202 aa		13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	CREB3L2	Q70SY1	520 aa		13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	SERPINA11	Q86U17	422 aa		13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	CLIP4	Q8N3C7	705 aa		13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	STK35	Q8TDR2	534 aa		13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	NANOS1	Q8WY41	292 aa	Known RBP	13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	C3orf49	Q96BT1	292 aa		13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	KATNB1	Q9BVA0	655 aa		13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	SPATA9	Q9BWV2	254 aa		13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	MOV10	Q9HCE1	1003 aa	Known RBP	13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	LPAR3	Q9UBY5	353 aa		13.38	□□□□□ -0.27
MRPL55-231	ENST00000492170	IGHV1-18	A0A0C4DH31	117 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170		A0A0G2JND7	137 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	TMEM229A	B2RXF0	380 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	NPIPB7	O75200	414 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	LY6H	O94772	140 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	CRYAA	P02489	173 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	TROVE2	P10155	538 aa	Known RBP eCLIP	13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	PRG2	P13727	222 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	ZNF16	P17020	682 aa	Predicted RBP	13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	HOXB9	P17482	250 aa	Predicted RBP	13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	SH3BGR	P55822	239 aa	Predicted RBP	13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	SWI5	Q1ZZU3	235 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	METTL21C	Q5VZV1	264 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	PHC2	Q8IXK0	858 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	MFSD8	Q8NHS3	518 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	VPS33A	Q96AX1	596 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	PIMREG	Q9BSJ6	248 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	TMEM120A	Q9BXJ8	343 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	BEX2	Q9BXY8	128 aa		13.37	□□□□□ -0.27
MRPL55-231	ENST00000492170	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	NDUFS8	O00217	210 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	VIM	P08670	466 aa	Known RBP	13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	IGHV4-31	P0DP07	118 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	SERPINF1	P36955	418 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	GZMK	P49863	264 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	LSM11	P83369	360 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	LGALS3BP	Q08380	585 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	GGTLC2	Q14390	218 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	MST1L	Q2TV78	715 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	C3orf36	Q3SXR2	165 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	ZNF311	Q5JNZ3	666 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	ANKRD16	Q6P6B7	361 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	SLC46A3	Q7Z3Q1	461 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	EPHX4	Q8IUS5	362 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	GTF2H4	Q92759	462 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	BCL2L2	Q92843	193 aa	Predicted RBP	13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	SLC35B4	Q969S0	331 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	SLC25A36	Q96CQ1	311 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	SORCS2	Q96PQ0	1159 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	LINC00470	Q9BZP3	86 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	SHARPIN	Q9H0F6	387 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	RAD21L1	Q9H4I0	556 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	RABEP2	Q9H5N1	569 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	MYOZ1	Q9NP98	299 aa	Predicted RBP	13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	CA10	Q9NS85	328 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	CCDC167	Q9P0B6	97 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	TRIM33	Q9UPN9	1127 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	RCE1	Q9Y256	329 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170	CHST2	Q9Y4C5	530 aa		13.36	□□□□□ -0.27
MRPL55-231	ENST00000492170		B9A039	149 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	LMX1B	O60663	402 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	UPK3A	O75631	287 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	PDE5A	O76074	875 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	PNMT	P11086	282 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	HOXB1	P14653	301 aa	Predicted RBP	13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	ZNF43	P17038	809 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	RPS5	P46782	204 aa	Known RBP	13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	ROR2	Q01974	943 aa	Known RBP	13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	NAAA	Q02083	359 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	LRIF1	Q5T3J3	769 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	LINGO2	Q7L985	606 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	BBS10	Q8TAM1	723 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	SPDL1	Q96EA4	605 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	VRK1	Q99986	396 aa	Predicted RBP	13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	PTDSS2	Q9BVG9	487 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	PAIP1	Q9H074	479 aa	Known RBP	13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	BCL2L10	Q9HD36	194 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	A4GALT	Q9NPC4	353 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	KLHL14	Q9P2G3	628 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	CRNN	Q9UBG3	495 aa	Predicted RBP	13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	RPS6KB2	Q9UBS0	482 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	KCNS2	Q9ULS6	477 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170	ARFGEF3	Q5TH69	2177 aa		13.35	□□□□□ -0.27
MRPL55-231	ENST00000492170		A0A096LPE4	126 aa		13.34	□□□□□ -0.27
MRPL55-231	ENST00000492170		A0A1W2PPZ6	126 aa		13.34	□□□□□ -0.27
MRPL55-231	ENST00000492170	VWC2L	B2RUY7	222 aa		13.34	□□□□□ -0.27
MRPL55-231	ENST00000492170	C5orf58	C9J3I9	102 aa		13.34	□□□□□ -0.27
MRPL55-231	ENST00000492170	FTCDNL1	E5RQL4	147 aa		13.34	□□□□□ -0.27
MRPL55-231	ENST00000492170	NR5A2	O00482	541 aa		13.34	□□□□□ -0.27
MRPL55-231	ENST00000492170	PHF1	O43189	567 aa	Predicted RBP	13.34	□□□□□ -0.27
MRPL55-231	ENST00000492170	CECR9	P0C854	216 aa		13.34	□□□□□ -0.27
MRPL55-231	ENST00000492170	NR4A2	P43354	598 aa		13.34	□□□□□ -0.27
MRPL55-231	ENST00000492170	ARFIP2	P53365	341 aa		13.34	□□□□□ -0.27
MRPL55-231	ENST00000492170	CLDN17	P56750	224 aa		13.34	□□□□□ -0.27

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