RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 FAM189A1O60320 539 aa2.57□□□□□ -2
VTA1-204ENST00000491881 SPAG6O75602 509 aa2.57□□□□□ -2
VTA1-204ENST00000491881 KRTAP5-8O75690 187 aa2.57□□□□□ -2
VTA1-204ENST00000491881 TNFSF13O75888 250 aa2.57□□□□□ -2
VTA1-204ENST00000491881 RBMY1DP0C7P1 496 aaKnown RBP2.57□□□□□ -2
VTA1-204ENST00000491881 CHTF8P0CG12 524 aa2.57□□□□□ -2
VTA1-204ENST00000491881 RBMY1A1P0DJD3 496 aaKnown RBP2.57□□□□□ -2
VTA1-204ENST00000491881 DDOSTP39656 456 aa2.57□□□□□ -2
VTA1-204ENST00000491881 CSNK1DP48730 415 aa2.57□□□□□ -2
VTA1-204ENST00000491881 DUSP3P51452 185 aaPredicted RBP2.57□□□□□ -2
VTA1-204ENST00000491881 CRYBB1P53674 252 aaPredicted RBP2.57□□□□□ -2
VTA1-204ENST00000491881 ATP1B3P54709 279 aa2.57□□□□□ -2
VTA1-204ENST00000491881 PLD1Q13393 1074 aa2.57□□□□□ -2
VTA1-204ENST00000491881 VGLL4Q14135 290 aa2.57□□□□□ -2
VTA1-204ENST00000491881 GPR157Q5UAW9 335 aa2.57□□□□□ -2
VTA1-204ENST00000491881 CYB5R2Q6BCY4 276 aa2.57□□□□□ -2
VTA1-204ENST00000491881 IGFL2Q6UWQ7 119 aa2.57□□□□□ -2
VTA1-204ENST00000491881 ZNF620Q6ZNG0 422 aa2.57□□□□□ -2
VTA1-204ENST00000491881 PAQR7Q86WK9 346 aa2.57□□□□□ -2
VTA1-204ENST00000491881 RALGPS2Q86X27 583 aaPredicted RBP2.57□□□□□ -2
VTA1-204ENST00000491881 FNDC5Q8NAU1 212 aa2.57□□□□□ -2
VTA1-204ENST00000491881 ITCHQ96J02 903 aa2.57□□□□□ -2
VTA1-204ENST00000491881 CCT7Q99832 543 aa2.57□□□□□ -2
VTA1-204ENST00000491881 RIOK1Q9BRS2 568 aaKnown RBP2.57□□□□□ -2
VTA1-204ENST00000491881 CRACR2AQ9BSW2 395 aa2.57□□□□□ -2
VTA1-204ENST00000491881 OR11A1Q9GZK7 315 aa2.57□□□□□ -2
VTA1-204ENST00000491881 YY1AP1Q9H869 796 aa2.57□□□□□ -2
VTA1-204ENST00000491881 QPCTLQ9NXS2 382 aa2.57□□□□□ -2
VTA1-204ENST00000491881 ADAM28Q9UKQ2 775 aa2.57□□□□□ -2
VTA1-204ENST00000491881 TMCC3Q9ULS5 477 aa2.57□□□□□ -2
VTA1-204ENST00000491881 PDS5BQ9NTI5 1447 aa2.57□□□□□ -2
VTA1-204ENST00000491881 HMGXB3Q12766 1538 aa2.57□□□□□ -2
VTA1-204ENST00000491881 CLASP1Q7Z460 1538 aa2.57□□□□□ -2
VTA1-204ENST00000491881 CCDC180Q9P1Z9 1646 aa2.57□□□□□ -2
VTA1-204ENST00000491881 CCDC182A6NF36 153 aa2.56□□□□□ -2
VTA1-204ENST00000491881 TOM1O60784 492 aa2.56□□□□□ -2
VTA1-204ENST00000491881 CLDN9O95484 217 aa2.56□□□□□ -2
VTA1-204ENST00000491881 NCK1P16333 377 aa2.56□□□□□ -2
VTA1-204ENST00000491881 RCC1P18754 421 aaPredicted RBP2.56□□□□□ -2
VTA1-204ENST00000491881 MAGEA8P43361 318 aa2.56□□□□□ -2
VTA1-204ENST00000491881 AIF1P55008 147 aa2.56□□□□□ -2
VTA1-204ENST00000491881 UCNP55089 124 aa2.56□□□□□ -2
VTA1-204ENST00000491881 CDK16Q00536 496 aa2.56□□□□□ -2
VTA1-204ENST00000491881 CHIT1Q13231 466 aa2.56□□□□□ -2
VTA1-204ENST00000491881 OR5I1Q13606 314 aa2.56□□□□□ -2
VTA1-204ENST00000491881 CYTH1Q15438 398 aa2.56□□□□□ -2
VTA1-204ENST00000491881 FILIP1LQ4L180 1135 aa2.56□□□□□ -2
VTA1-204ENST00000491881 CASC1Q6TDU7 716 aa2.56□□□□□ -2
VTA1-204ENST00000491881 ACP7Q6ZNF0 438 aa2.56□□□□□ -2
VTA1-204ENST00000491881 ZNF546Q86UE3 836 aa2.56□□□□□ -2
VTA1-204ENST00000491881 PLA2G4DQ86XP0 818 aa2.56□□□□□ -2
VTA1-204ENST00000491881 ECHDC2Q86YB7 292 aa2.56□□□□□ -2
VTA1-204ENST00000491881 NUDCD3Q8IVD9 361 aa2.56□□□□□ -2
VTA1-204ENST00000491881 MFSD6LQ8IWD5 586 aa2.56□□□□□ -2
VTA1-204ENST00000491881 ENTHD1Q8IYW4 607 aa2.56□□□□□ -2
VTA1-204ENST00000491881 TBC1D21Q8IYX1 336 aa2.56□□□□□ -2
VTA1-204ENST00000491881 TMEM61Q8N0U2 210 aa2.56□□□□□ -2
VTA1-204ENST00000491881 ZNF433Q8N7K0 673 aaPredicted RBP2.56□□□□□ -2
VTA1-204ENST00000491881 ARIH2OSQ8N7S6 290 aa2.56□□□□□ -2
VTA1-204ENST00000491881 OR6X1Q8NH79 312 aa2.56□□□□□ -2
VTA1-204ENST00000491881 MAGEE2Q8TD90 523 aaPredicted RBP2.56□□□□□ -2
VTA1-204ENST00000491881 NDRG1Q92597 394 aaKnown RBP2.56□□□□□ -2
VTA1-204ENST00000491881 TM4SF19Q96DZ7 209 aa2.56□□□□□ -2
VTA1-204ENST00000491881 FCRL1Q96LA6 429 aa2.56□□□□□ -2
VTA1-204ENST00000491881 ZNF641Q96N77 438 aaPredicted RBP2.56□□□□□ -2
VTA1-204ENST00000491881 OR2M2Q96R28 347 aa2.56□□□□□ -2
VTA1-204ENST00000491881 SLC39A3Q9BRY0 314 aa2.56□□□□□ -2
VTA1-204ENST00000491881 CHRDL1Q9BU40 450 aa2.56□□□□□ -2
VTA1-204ENST00000491881 SLC25A39Q9BZJ4 359 aaPredicted RBP2.56□□□□□ -2
VTA1-204ENST00000491881 RANBP3Q9H6Z4 567 aaPredicted RBP2.56□□□□□ -2
VTA1-204ENST00000491881 MCCC2Q9HCC0 563 aa2.56□□□□□ -2
VTA1-204ENST00000491881 IL26Q9NPH9 171 aa2.56□□□□□ -2
VTA1-204ENST00000491881 KCNIP3Q9Y2W7 256 aa2.56□□□□□ -2
VTA1-204ENST00000491881 SLC25A15Q9Y619 301 aa2.56□□□□□ -2
VTA1-204ENST00000491881 SMARCA4P51532 1647 aa2.56□□□□□ -2
VTA1-204ENST00000491881 ADAMTSL3P82987 1691 aa2.56□□□□□ -2
VTA1-204ENST00000491881 STRCQ7RTU9 1775 aa2.56□□□□□ -2
VTA1-204ENST00000491881 CHD8Q9HCK8 2581 aa2.55□□□□□ -2
VTA1-204ENST00000491881 TRBV6-6A0A0A6YYG2 114 aa2.55□□□□□ -2
VTA1-204ENST00000491881 OR5B21A6NL26 309 aa2.55□□□□□ -2
VTA1-204ENST00000491881 C12orf71A8MTZ7 269 aa2.55□□□□□ -2
VTA1-204ENST00000491881 HSD17B6O14756 317 aa2.55□□□□□ -2
VTA1-204ENST00000491881 CACNA1GO43497 2377 aa2.55□□□□□ -2
VTA1-204ENST00000491881 TDRD6O60522 2096 aaKnown RBP2.55□□□□□ -2
VTA1-204ENST00000491881 MEGF6O75095 1541 aa2.55□□□□□ -2
VTA1-204ENST00000491881 MMP1P03956 469 aa2.55□□□□□ -2
VTA1-204ENST00000491881 HPGDP15428 266 aa2.55□□□□□ -2
VTA1-204ENST00000491881 TBPP20226 339 aa2.55□□□□□ -2
VTA1-204ENST00000491881 RPS10P46783 165 aaKnown RBP2.55□□□□□ -2
VTA1-204ENST00000491881 CEBPDP49716 269 aaPredicted RBP2.55□□□□□ -2
VTA1-204ENST00000491881 ARFIP1P53367 373 aa2.55□□□□□ -2
VTA1-204ENST00000491881 ACTR1AP61163 376 aa2.55□□□□□ -2
VTA1-204ENST00000491881 ENPP6Q6UWR7 440 aa2.55□□□□□ -2
VTA1-204ENST00000491881 COX15Q7KZN9 410 aa2.55□□□□□ -2
VTA1-204ENST00000491881 ZNF429Q86V71 674 aa2.55□□□□□ -2
VTA1-204ENST00000491881 LRRC75A-AS1Q8N1F1 130 aa2.55□□□□□ -2
VTA1-204ENST00000491881 Q8N9L7 120 aa2.55□□□□□ -2
VTA1-204ENST00000491881 FAM83FQ8NEG4 500 aaPredicted RBP2.55□□□□□ -2
VTA1-204ENST00000491881 CCDC54Q8NEL0 328 aa2.55□□□□□ -2
VTA1-204ENST00000491881 OR51G1Q8NGK1 321 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms