RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 BLOC1S3Q6QNY0 202 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 KLHL17Q6TDP4 642 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 CXXC5Q7LFL8 322 aaKnown RBP7.74□□□□□ -1.17
HDAC3-211ENST00000491581 P2RY8Q86VZ1 359 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 PHC2Q8IXK0 858 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 GPR32P1Q8NGA4 272 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 FGFBP3Q8TAT2 258 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 C10orf105Q8TEF2 133 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 PMM1Q92871 262 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 SPDL1Q96EA4 605 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 VRK1Q99986 396 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-211ENST00000491581 CPPED1Q9BRF8 314 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-211ENST00000491581 RHNO1Q9BSD3 238 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 TAPBPLQ9BX59 468 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 RMND5AQ9H871 391 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 TCF7L2Q9NQB0 619 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 MED29Q9NX70 200 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 DCTN4Q9UJW0 460 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 SVEP1Q4LDE5 3571 aa7.74□□□□□ -1.17
HDAC3-211ENST00000491581 TLN2Q9Y4G6 2542 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 IGHV4-61A0A0C4DH41 118 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 LRP5LA4QPB2 252 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 ELOA3DA6NLF2 546 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-211ENST00000491581 M0R3G1 203 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 TRAF3IP2O43734 574 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-211ENST00000491581 SHOX2O60902 331 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-211ENST00000491581 ZNF432O94892 652 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 SNUPNO95149 360 aaKnown RBP7.73□□□□□ -1.17
HDAC3-211ENST00000491581 AHSA1O95433 338 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 HLA-HP01893 362 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 BMP2P12643 396 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 THBS4P35443 961 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 CDH12P55289 794 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 PRPS1P60891 318 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 COPZ1P61923 177 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 CDK6Q00534 326 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 NAAAQ02083 359 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 LRRC74AQ0VAA2 488 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 NPRL3Q12980 569 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 GNA13Q14344 377 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 GGTLC2Q14390 218 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 LARS2Q15031 903 aaKnown RBP7.73□□□□□ -1.17
HDAC3-211ENST00000491581 ADIPOQQ15848 244 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 CEACAM16Q2WEN9 425 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 ELOA3BQ3SY89 546 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 LRIF1Q5T3J3 769 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 GCNT6Q5T4J0 391 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 OR7E24Q6IFN5 339 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 ANKRD16Q6P6B7 361 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 KLHL24Q6TFL4 600 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 CLEC2AQ6UVW9 174 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 DLEU7Q6UYE1 221 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 MDP1Q86V88 176 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 PTOV1Q86YD1 416 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 HOMEZQ8IX15 550 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 ZNF440Q8IYI8 595 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 TMEM123Q8N131 208 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 SVOPLQ8N434 492 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 LRRC17Q8N6Y2 441 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 ELOA3Q8NG57 546 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 VANGL1Q8TAA9 524 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-211ENST00000491581 FAM168AQ92567 244 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 FOXN4Q96NZ1 517 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 SLC38A2Q96QD8 506 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 OR2M2Q96R28 347 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 TNFRSF13CQ96RJ3 184 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 CHODLQ9H9P2 273 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 GPR35Q9HC97 309 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 BCL2L10Q9HD36 194 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 KLHL14Q9P2G3 628 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 GMPR2Q9P2T1 348 aaKnown RBP7.73□□□□□ -1.17
HDAC3-211ENST00000491581 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-211ENST00000491581 FZR1Q9UM11 496 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 AMDHD2Q9Y303 409 aa7.73□□□□□ -1.17
HDAC3-211ENST00000491581 RTTNQ86VV8 2226 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 MALRD1Q5VYJ5 2156 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 TMEM129A0AVI4 362 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 CPSF4LA6NMK7 179 aaKnown RBP7.72□□□□□ -1.17
HDAC3-211ENST00000491581 A8MV72 311 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-211ENST00000491581 C5orf58C9J3I9 102 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 ZNF587BE7ETH6 402 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 C11orf98E9PRG8 122 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 SLCO1B7G3V0H7 640 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 H7C417 338 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 KPNA4O00629 521 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-211ENST00000491581 POLR3GO15318 223 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-211ENST00000491581 LYPD3O95274 346 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 BGLAPP02818 100 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 TP53P04637 393 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-211ENST00000491581 OR4A8P0C604 315 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 UQCRBP14927 111 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 APOBEC3AP31941 199 aaPredicted RBP7.72□□□□□ -1.17
HDAC3-211ENST00000491581 CAPZA2P47755 286 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 ANXA11P50995 505 aaKnown RBP7.72□□□□□ -1.17
HDAC3-211ENST00000491581 CRYBA2P53672 197 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 SLC18A1P54219 525 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 CAMK2DQ13557 499 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 SCARB2Q14108 478 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 MELKQ14680 651 aa7.72□□□□□ -1.17
HDAC3-211ENST00000491581 OR1Q1Q15612 314 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms