RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 IKZF5Q9H5V7 419 aa7.23□□□□□ -1.25
LSM2-213ENST00000491421 TMEM38AQ9H6F2 299 aa7.23□□□□□ -1.25
LSM2-213ENST00000491421 C12orf10Q9HB07 376 aa7.23□□□□□ -1.25
LSM2-213ENST00000491421 OBP2BQ9NPH6 170 aa7.23□□□□□ -1.25
LSM2-213ENST00000491421 CBLN4Q9NTU7 201 aa7.23□□□□□ -1.25
LSM2-213ENST00000491421 SELENONQ9NZV5 590 aa7.23□□□□□ -1.25
LSM2-213ENST00000491421 SEC14L4Q9UDX3 406 aa7.23□□□□□ -1.25
LSM2-213ENST00000491421 TESQ9UGI8 421 aaKnown RBP7.23□□□□□ -1.25
LSM2-213ENST00000491421 LEF1Q9UJU2 399 aaPredicted RBP7.23□□□□□ -1.25
LSM2-213ENST00000491421 SLC13A4Q9UKG4 626 aa7.23□□□□□ -1.25
LSM2-213ENST00000491421 TRIM33Q9UPN9 1127 aa7.23□□□□□ -1.25
LSM2-213ENST00000491421 RCE1Q9Y256 329 aa7.23□□□□□ -1.25
LSM2-213ENST00000491421 ANGPT4Q9Y264 503 aa7.23□□□□□ -1.25
LSM2-213ENST00000491421 DSCAMO60469 2012 aa7.23□□□□□ -1.25
LSM2-213ENST00000491421 HIVEP2P31629 2446 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 FREM1Q5H8C1 2179 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 PRR14LQ5THK1 2151 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 TLN2Q9Y4G6 2542 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 IGKV1D-42A0A075B6H8 117 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 TRAV36DV7A0A075B6V5 113 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 M0R082 166 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 AIM2O14862 343 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 ANGPT2O15123 496 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 SSX4O60224 188 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 SLC43A1O75387 559 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 UPK3AO75631 287 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 TP53P04637 393 aaPredicted RBP7.22□□□□□ -1.25
LSM2-213ENST00000491421 BMP4P12644 408 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 SH3BGRP55822 239 aaPredicted RBP7.22□□□□□ -1.25
LSM2-213ENST00000491421 CLDN17P56750 224 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 RGS8P57771 180 aaPredicted RBP7.22□□□□□ -1.25
LSM2-213ENST00000491421 UBE2NP61088 152 aaKnown RBP7.22□□□□□ -1.25
LSM2-213ENST00000491421 ROR2Q01974 943 aaKnown RBP7.22□□□□□ -1.25
LSM2-213ENST00000491421 CHRNB3Q05901 458 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 DMTNQ08495 405 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 RAB35Q15286 201 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 ADRM1Q16186 407 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 CYP51A1Q16850 503 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 FAM69AQ5T7M9 428 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 FAM91A1Q658Y4 838 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 HMBOX1Q6NT76 420 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 ANKRD16Q6P6B7 361 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 ULK3Q6PHR2 472 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 DLEU7Q6UYE1 221 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 DNM1P46Q6ZS02 220 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 H1FNTQ75WM6 255 aaPredicted RBP7.22□□□□□ -1.25
LSM2-213ENST00000491421 LINGO2Q7L985 606 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 NET1Q7Z628 596 aaPredicted RBP7.22□□□□□ -1.25
LSM2-213ENST00000491421 DHDDSQ86SQ9 333 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 JAZF1Q86VZ6 243 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 C11orf65Q8NCR3 313 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 HIPK4Q8NE63 616 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 BHLHE22Q8NFJ8 381 aaPredicted RBP7.22□□□□□ -1.25
LSM2-213ENST00000491421 OR1K1Q8NGR3 316 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 ZNF417Q8TAU3 575 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 STON2Q8WXE9 905 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 HTRA1Q92743 480 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 SLC47A1Q96FL8 570 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 BOD1Q96IK1 185 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 MAGEB18Q96M61 343 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 OXGR1Q96P68 337 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 SLC38A2Q96QD8 506 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 ZNF587Q96SQ5 575 aaPredicted RBP7.22□□□□□ -1.25
LSM2-213ENST00000491421 KCNS3Q9BQ31 491 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 CPPED1Q9BRF8 314 aaPredicted RBP7.22□□□□□ -1.25
LSM2-213ENST00000491421 RHNO1Q9BSD3 238 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 PRR14Q9BWN1 585 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 RSPO3Q9BXY4 272 aaPredicted RBP7.22□□□□□ -1.25
LSM2-213ENST00000491421 LINC00470Q9BZP3 86 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 VIPAS39Q9H9C1 493 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 TMEM27Q9HBJ8 222 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 NPHS2Q9NP85 383 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 ARGLU1Q9NWB6 273 aaPredicted RBP7.22□□□□□ -1.25
LSM2-213ENST00000491421 KLHL14Q9P2G3 628 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 B3GAT1Q9P2W7 334 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 MOKQ9UQ07 419 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 NDUFAF1Q9Y375 327 aa7.22□□□□□ -1.25
LSM2-213ENST00000491421 CSPG4Q6UVK1 2322 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 JMJD1CQ15652 2540 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 A0A087WUJ7 227 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 A0A096LPE4 126 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 ARPC4-TTLL3A0A0A6YYG9 625 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 A0A0B4J2E0 115 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 IGHV1-18A0A0C4DH31 117 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 A0A0G2JND7 137 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 A0A1B0GX12 115 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 A0A1W2PPZ6 126 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 H7C417 338 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 AKAP8O43823 692 aaKnown RBP7.21□□□□□ -1.26
LSM2-213ENST00000491421 FZD7O75084 574 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 ZNF432O94892 652 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 CRYAAP02489 173 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 NQO1P15559 274 aaKnown RBP7.21□□□□□ -1.26
LSM2-213ENST00000491421 CBLP22681 906 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 PAX7P23759 505 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 GRPRP30550 384 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 APOBEC3AP31941 199 aaPredicted RBP7.21□□□□□ -1.26
LSM2-213ENST00000491421 MTPNP58546 118 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 DSCR9P59020 149 aa7.21□□□□□ -1.26
LSM2-213ENST00000491421 TUBA1BP68363 451 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms