RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 VDAC3Q9Y277 283 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 AK6Q9Y3D8 172 aaKnown RBP6.73□□□□□ -1.33
NPHP3-208ENST00000490993 PRAMEF25A6NGN4 478 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 DISC1C4P0D8 188 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 ICOSLGO75144 302 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 H2AFB2P0C5Z0 115 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 EVI2BP34910 448 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 CD83Q01151 205 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 CLPPQ16740 277 aaPredicted RBP6.73□□□□□ -1.33
NPHP3-208ENST00000490993 AADACL4Q5VUY2 407 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 CCDC71Q8IV32 467 aaPredicted RBP6.73□□□□□ -1.33
NPHP3-208ENST00000490993 BBS1Q8NFJ9 593 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 RELTQ969Z4 430 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 SLC6A14Q9UN76 642 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 TRAPPC4Q9Y296 219 aa6.73□□□□□ -1.33
NPHP3-208ENST00000490993 MN1Q10571 1320 aaPredicted RBP6.73□□□□□ -1.33
NPHP3-208ENST00000490993 MYOFQ9NZM1 2061 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 TVP23AA6NH52 213 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 IDSB3KWA1 339 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ARPC3O15145 178 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 TRAPPC6AO75865 159 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 IGHG1P01857 330 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 MAS1P04201 325 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 APEHP13798 732 aaKnown RBP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 EIF1AXP47813 144 aaKnown RBP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 SLC6A9P48067 706 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 PPP1CAP62136 330 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ACSM1Q08AH1 577 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ALKBH1Q13686 389 aaKnown RBP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 VWA2Q5GFL6 755 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ZMAT1Q5H9K5 638 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 B3GLCTQ6Y288 498 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 FAM83FQ8NEG4 500 aaPredicted RBP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 SLC25A43Q8WUT9 341 aaPredicted RBP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 TTC9Q92623 222 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 OR5B2Q96R09 309 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ZNF587Q96SQ5 575 aaPredicted RBP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 DUSP15Q9H1R2 295 aaPredicted RBP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 RNF167Q9H6Y7 350 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 PCDHB16Q9NRJ7 776 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 SCP2D1Q9UJQ7 156 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 NSG1A0A0A6YYJ2 146 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 SULT2B1O00204 365 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 CLEC2LP0C7M8 214 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 LSSP48449 732 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 PLGLB1Q02325 96 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 DCAF12Q5T6F0 453 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 HES5Q5TA89 166 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 CCDC190Q86UF4 302 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 TMEM17Q86X19 198 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 D2HGDHQ8N465 521 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 OR4N2Q8NGD1 307 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 OR1L3Q8NH93 324 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 FAM131CQ96AQ9 280 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 RASD2Q96D21 266 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 FUZQ9BT04 418 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 RANBP3Q9H6Z4 567 aaPredicted RBP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ELOVL3Q9HB03 270 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ETV7Q9Y603 341 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 PIKFYVEQ9Y2I7 2098 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 FAM172BPA6NC97 362 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ACOT7O00154 380 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ZNF593O00488 134 aaPredicted RBP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 FZD7O75084 574 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ZGLP1P0C6A0 271 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 SHC1P29353 583 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ETV6P41212 452 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 CRYBB2P43320 205 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 SLC25A1P53007 311 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ACTBP60709 375 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ACTG1P63261 375 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 SLC35A1P78382 337 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 PSG6Q00889 435 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 FABP5Q01469 135 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 TRA2AQ13595 282 aaKnown RBP eCLIP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 H1FNTQ75WM6 255 aaPredicted RBP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ZNF101Q8IZC7 436 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 OR8K3Q8NH51 312 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 IFI44Q8TCB0 444 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 Q96M85 177 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 WDFY2Q96P53 400 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 CACNG6Q9BXT2 260 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ATG5Q9H1Y0 275 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 MAN2C1Q9NTJ4 1040 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 HAO2Q9NYQ3 351 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 NLKQ9UBE8 527 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 HHLA2Q9UM44 414 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ANAPC1Q9H1A4 1944 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 A0A1W2PS29 197 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 TMEM72A0PK05 275 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 H3BML4 177 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 PRAF2O60831 178 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 UBL3O95164 117 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 FARS2O95363 451 aaKnown RBP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 NAGAP17050 411 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 SSR4P51571 173 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 EGR3Q06889 387 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ASAH1Q13510 395 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 SSX1Q16384 188 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 SGCAQ16586 387 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms