RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 ZNF587BE7ETH6 402 aa27.48■■□□□ 1.99
LDB1-204ENST00000490751 ZNF43P17038 809 aa27.48■■□□□ 1.99
LDB1-204ENST00000490751 GRPRP30550 384 aa27.48■■□□□ 1.99
LDB1-204ENST00000490751 KLHL24Q6TFL4 600 aa27.48■■□□□ 1.99
LDB1-204ENST00000490751 FGFR1OP2Q9NVK5 253 aa27.48■■□□□ 1.99
LDB1-204ENST00000490751 ZNF446Q9NWS9 450 aa27.48■■□□□ 1.99
LDB1-204ENST00000490751 KLHL14Q9P2G3 628 aa27.48■■□□□ 1.99
LDB1-204ENST00000490751 B3GAT1Q9P2W7 334 aa27.48■■□□□ 1.99
LDB1-204ENST00000490751 A0A087WUJ7 227 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 OR6C65A6NJZ3 312 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 FAM171A2A8MVW0 826 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 M0QX08 132 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 M0R3H8 397 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 FBP2O00757 339 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 LGI1O95970 557 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 CBLP22681 906 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 CLDN17P56750 224 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 PRPS1P60891 318 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 SF3A3Q12874 501 aaKnown RBP eCLIP27.47■■□□□ 1.99
LDB1-204ENST00000490751 HIKESHIQ53FT3 197 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 DTX2Q86UW9 622 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 OXGR1Q96P68 337 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 ARHGDIGQ99819 225 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 B3GALT5Q9Y2C3 310 aa27.47■■□□□ 1.99
LDB1-204ENST00000490751 HEATR1Q9H583 2144 aaKnown RBP27.46■■□□□ 1.99
LDB1-204ENST00000490751 E7EQL1 145 aa27.46■■□□□ 1.99
LDB1-204ENST00000490751 UPK3AO75631 287 aa27.46■■□□□ 1.99
LDB1-204ENST00000490751 CD8AP01732 235 aa27.46■■□□□ 1.99
LDB1-204ENST00000490751 HOXB4P17483 251 aaPredicted RBP27.46■■□□□ 1.99
LDB1-204ENST00000490751 LTBQ06643 244 aa27.46■■□□□ 1.99
LDB1-204ENST00000490751 DUSP7Q16829 419 aa27.46■■□□□ 1.99
LDB1-204ENST00000490751 TRMT5Q32P41 509 aaKnown RBP27.46■■□□□ 1.99
LDB1-204ENST00000490751 C1QTNF12Q5T7M4 302 aa27.46■■□□□ 1.99
LDB1-204ENST00000490751 LINGO2Q7L985 606 aa27.46■■□□□ 1.99
LDB1-204ENST00000490751 SLC30A8Q8IWU4 369 aa27.46■■□□□ 1.99
LDB1-204ENST00000490751 GPR32P1Q8NGA4 272 aa27.46■■□□□ 1.99
LDB1-204ENST00000490751 OR10A6Q8NH74 314 aa27.46■■□□□ 1.99
LDB1-204ENST00000490751 LINC00470Q9BZP3 86 aa27.46■■□□□ 1.99
LDB1-204ENST00000490751 RCE1Q9Y256 329 aa27.46■■□□□ 1.99
LDB1-204ENST00000490751 PLCE1Q9P212 2302 aa27.46■■□□□ 1.99
LDB1-204ENST00000490751 WNT11O96014 354 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 HEXAP06865 529 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 PTNP21246 168 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 PCGF2P35227 344 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 ARFIP2P53365 341 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 CDH12P55289 794 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 CGB2Q6NT52 195 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 B3GLCTQ6Y288 498 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 H1FNTQ75WM6 255 aaPredicted RBP27.45■■□□□ 1.98
LDB1-204ENST00000490751 DEPDC4Q8N2C3 294 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 OR1K1Q8NGR3 316 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 BOD1Q96IK1 185 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 EPYCQ99645 322 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 MCHR1Q99705 422 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 GRIP2Q9C0E4 1043 aa27.45■■□□□ 1.98
LDB1-204ENST00000490751 LY6G6DO95868 133 aa27.44■■□□□ 1.98
LDB1-204ENST00000490751 IL1RL1Q01638 556 aa27.44■■□□□ 1.98
LDB1-204ENST00000490751 C1DQ13901 141 aaKnown RBP27.44■■□□□ 1.98
LDB1-204ENST00000490751 NRF1Q16656 503 aa27.44■■□□□ 1.98
LDB1-204ENST00000490751 TBRG1Q3YBR2 411 aa27.44■■□□□ 1.98
LDB1-204ENST00000490751 SWT1Q5T5J6 900 aaKnown RBP27.44■■□□□ 1.98
LDB1-204ENST00000490751 AGAP6Q5VW22 663 aa27.44■■□□□ 1.98
LDB1-204ENST00000490751 PATL1Q86TB9 770 aaKnown RBP27.44■■□□□ 1.98
LDB1-204ENST00000490751 OR6S1Q8NH40 331 aa27.44■■□□□ 1.98
LDB1-204ENST00000490751 DHRS9Q9BPW9 319 aa27.44■■□□□ 1.98
LDB1-204ENST00000490751 FMO6PO60774 539 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 ZNF432O94892 652 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 C8BP07358 591 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 CYLC2Q14093 348 aaPredicted RBP27.43■■□□□ 1.98
LDB1-204ENST00000490751 MFSD13AQ14CX5 517 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 ETFDHQ16134 617 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 CLEC12BQ2HXU8 276 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 NANOGP8Q6NSW7 305 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 HMBOX1Q6NT76 420 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 ADPRHL1Q8NDY3 354 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 OR6T1Q8NGN1 323 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 NANOGQ9H9S0 305 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 OBP2BQ9NPH6 170 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 MRGBPQ9NV56 204 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 CORINQ9Y5Q5 1042 aa27.43■■□□□ 1.98
LDB1-204ENST00000490751 BGLAPP02818 100 aa27.42■■□□□ 1.98
LDB1-204ENST00000490751 VIMP08670 466 aaKnown RBP27.42■■□□□ 1.98
LDB1-204ENST00000490751 TTKP33981 857 aa27.42■■□□□ 1.98
LDB1-204ENST00000490751 GZMMP51124 257 aa27.42■■□□□ 1.98
LDB1-204ENST00000490751 ROR2Q01974 943 aaKnown RBP27.42■■□□□ 1.98
LDB1-204ENST00000490751 KLF10Q13118 480 aa27.42■■□□□ 1.98
LDB1-204ENST00000490751 TNK1Q13470 666 aa27.42■■□□□ 1.98
LDB1-204ENST00000490751 VEZF1Q14119 521 aa27.42■■□□□ 1.98
LDB1-204ENST00000490751 NPTX1Q15818 432 aa27.42■■□□□ 1.98
LDB1-204ENST00000490751 VMACQ2NL98 169 aa27.42■■□□□ 1.98
LDB1-204ENST00000490751 INTS11Q5TA45 600 aaKnown RBP27.42■■□□□ 1.98
LDB1-204ENST00000490751 ZNF613Q6PF04 617 aa27.42■■□□□ 1.98
LDB1-204ENST00000490751 TAMM41Q96BW9 452 aa27.42■■□□□ 1.98
LDB1-204ENST00000490751 TMEM43Q9BTV4 400 aa27.42■■□□□ 1.98
LDB1-204ENST00000490751 NIPBLQ6KC79 2804 aaeCLIP27.42■■□□□ 1.98
LDB1-204ENST00000490751 TRAF3IP2O43734 574 aaPredicted RBP27.41■■□□□ 1.98
LDB1-204ENST00000490751 NDUFS7O75251 213 aa27.41■■□□□ 1.98
LDB1-204ENST00000490751 SLC43A1O75387 559 aa27.41■■□□□ 1.98
LDB1-204ENST00000490751 IGHV4-39P01824 125 aa27.41■■□□□ 1.98
LDB1-204ENST00000490751 NQO1P15559 274 aaKnown RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms