RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 SNUPNO95149 360 aaKnown RBP13.45□□□□□ -0.26
COL2A1-207ENST00000490609 VAMP5O95183 116 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 CRYAAP02489 173 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 BCHEP06276 602 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 TACSTD2P09758 323 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 ZCCHC18P0CG32 403 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 CBR1P16152 277 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 IDH3GP51553 393 aaPredicted RBP13.45□□□□□ -0.26
COL2A1-207ENST00000490609 ROR2Q01974 943 aaKnown RBP13.45□□□□□ -0.26
COL2A1-207ENST00000490609 RIN1Q13671 783 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 CR1LQ2VPA4 569 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 KRT71Q3SY84 523 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 LIN52Q52LA3 116 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 VHLLQ6RSH7 139 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 SLC46A3Q7Z3Q1 461 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 STK35Q8TDR2 534 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 TAAR8Q969N4 342 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 TMEM19Q96HH6 336 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 MAELQ96JY0 434 aaKnown RBP13.45□□□□□ -0.26
COL2A1-207ENST00000490609 SPATA9Q9BWV2 254 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 TPT1P8Q9HAU6 139 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 GPR35Q9HC97 309 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 B3GNT2Q9NY97 397 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 RASD1Q9Y272 281 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 FKBP7Q9Y680 259 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 TRRAPQ9Y4A5 3859 aa13.45□□□□□ -0.26
COL2A1-207ENST00000490609 ARHGAP32A7KAX9 2087 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 IGHV2OR16-5A0A0B4J2B6 119 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 LYNX1G3V0Z9 82 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 RFXANKO14593 260 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 KRT75O95678 551 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 LYNX1P0DP58 116 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 HOXB1P14653 301 aaPredicted RBP13.44□□□□□ -0.26
COL2A1-207ENST00000490609 RPS5P46782 204 aaKnown RBP13.44□□□□□ -0.26
COL2A1-207ENST00000490609 CLDN17P56750 224 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 GNA13Q14344 377 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 TRIP10Q15642 601 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 CARTPTQ16568 116 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 SLC9B1Q4ZJI4 515 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 PRAMEF8Q5VWM4 474 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 PRAMEF7Q5VXH5 474 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 KLHL24Q6TFL4 600 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 ABHD12BQ7Z5M8 362 aaPredicted RBP13.44□□□□□ -0.26
COL2A1-207ENST00000490609 CDK20Q8IZL9 346 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 TMEM123Q8N131 208 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 C10orf111Q8N326 155 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 SVOPLQ8N434 492 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 OR9I1Q8NGQ6 314 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 ZNF442Q9H7R0 627 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 NOX3Q9HBY0 568 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 P2RX2Q9UBL9 471 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.44□□□□□ -0.26
COL2A1-207ENST00000490609 V9GYY5 206 aaPredicted RBP13.44□□□□□ -0.26
COL2A1-207ENST00000490609 CMYA5Q8N3K9 4069 aa13.44□□□□□ -0.26
COL2A1-207ENST00000490609 MS4A18H0YCH9 400 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 RGS16O15492 202 aaPredicted RBP13.43□□□□□ -0.26
COL2A1-207ENST00000490609 HPRP00739 348 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 DAOP14920 347 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 UQCRBP14927 111 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 HTR2AP28223 471 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 CRATP43155 626 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 DSTNP60981 165 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 MS4A18Q3C1V0 323 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 PDCD4Q53EL6 469 aaKnown RBP13.43□□□□□ -0.26
COL2A1-207ENST00000490609 C6orf89Q6UWU4 347 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 ANKK1Q8NFD2 765 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 OR4F15Q8NGB8 312 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 MAL2Q969L2 176 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 SLC25A36Q96CQ1 311 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 ZNF317Q96PQ6 595 aaPredicted RBP13.43□□□□□ -0.26
COL2A1-207ENST00000490609 WFDC6Q9BQY6 131 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 TAPBPLQ9BX59 468 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 PAIP1Q9H074 479 aaKnown RBP13.43□□□□□ -0.26
COL2A1-207ENST00000490609 MYOZ1Q9NP98 299 aaPredicted RBP13.43□□□□□ -0.26
COL2A1-207ENST00000490609 ZNF224Q9NZL3 707 aa13.43□□□□□ -0.26
COL2A1-207ENST00000490609 A0A0G2JPF8 293 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 OR6C65A6NJZ3 312 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 HNRNPCL2B2RXH8 293 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 HNRNPCL3B7ZW38 293 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 hCG_2039718K7EN88 272 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 HDAC3O15379 428 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 TRAF3IP2O43734 574 aaPredicted RBP13.42□□□□□ -0.26
COL2A1-207ENST00000490609 HNRNPCL1O60812 293 aaKnown RBP13.42□□□□□ -0.26
COL2A1-207ENST00000490609 SLC22A3O75751 556 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 KRT33AO76009 404 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 SEC14L2O76054 403 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 IL6P05231 212 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 HNRNPCL4P0DMR1 293 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 BMP2P12643 396 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 HLA-DOBP13765 273 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 ANXA11P50995 505 aaKnown RBP13.42□□□□□ -0.26
COL2A1-207ENST00000490609 CRISP3P54108 245 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 UBE2NP61088 152 aaKnown RBP13.42□□□□□ -0.26
COL2A1-207ENST00000490609 LRRC74AQ0VAA2 488 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 CEACAM16Q2WEN9 425 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 IQCCQ4KMZ1 466 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 ATG16L1Q676U5 607 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 MDP1Q86V88 176 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 CARM1Q86X55 608 aa13.42□□□□□ -0.26
COL2A1-207ENST00000490609 MSRB3Q8IXL7 192 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms