RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CHIAQ9BZP6 476 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 MRPL46Q9H2W6 279 aaKnown RBP11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 REEP4Q9H6H4 257 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 MARCH7Q9H992 704 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 HINT3Q9NQE9 182 aaKnown RBP11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 GPATCH2Q9NW75 528 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 MKLN1Q9UL63 735 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 FAF1Q9UNN5 650 aaPredicted RBP11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 INSIG2Q9Y5U4 225 aa11.58□□□□□ -0.56
EXOSC3-207ENST00000490516 DOCK11Q5JSL3 2073 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 SRRM5B3KS81 715 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 HLA-HP01893 362 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 ZNF14P17017 642 aaPredicted RBP11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 IDH2P48735 452 aaKnown RBP11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 PROK1P58294 105 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 RPS23P62266 143 aaKnown RBP11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 TEKQ02763 1124 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 HNRNPA0Q13151 305 aaKnown RBP11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 MAPK14Q16539 360 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 HFEQ30201 348 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 DEFB112Q30KQ8 113 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 MMEL1Q495T6 779 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 TEX35Q5T0J7 233 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 TMEM225Q6GV28 225 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 EPHX4Q8IUS5 362 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 CLHC1Q8NHS4 586 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 ZNF75AQ96N20 296 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 OR7D2Q96RA2 312 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 LINC00470Q9BZP3 86 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 DPH5Q9H2P9 285 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 PIF1Q9H611 641 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 SLC6A13Q9NSD5 602 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 B3GNT2Q9NY97 397 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 OSGIN1Q9UJX0 560 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 SNX12Q9UMY4 172 aa11.57□□□□□ -0.56
EXOSC3-207ENST00000490516 C5orf63A6NC05 138 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 LIPT2A6NK58 231 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 RPL36A-HNRNPH2H7BZ11 118 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 ZNF208O43345 1280 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 TPD52L2O43399 206 aaKnown RBP11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 TBX19O60806 448 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 PLATP00750 562 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 IGHMP01871 453 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 CD79AP11912 226 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 MAGEA12P43365 314 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 CCT3P49368 545 aaKnown RBP11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 P2RY4P51582 365 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 SEC61A1P61619 476 aaKnown RBP11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 GALK2Q01415 458 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 PIGFQ07326 219 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 PDE7AQ13946 482 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 KIAA0040Q15053 153 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 PDCD1Q15116 288 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 CEACAM16Q2WEN9 425 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 PCGF3Q3KNV8 242 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 PMM1Q92871 262 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 ZDHHC16Q969W1 377 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 TSSK3Q96PN8 268 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 SLC30A2Q9BRI3 323 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 GPR35Q9HC97 309 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 DECR2Q9NUI1 292 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 AURKAIP1Q9NWT8 199 aaPredicted RBP11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 BAIAP2L1Q9UHR4 511 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 PPP2R2CQ9Y2T4 447 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 DSPPQ9NZW4 1301 aa11.56□□□□□ -0.56
EXOSC3-207ENST00000490516 AP3D1O14617 1153 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 SEC22BO75396 215 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 ERLIN1O75477 346 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 GPIP06744 558 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 MAKP20794 623 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 TACR3P29371 465 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 MAGEA4P43358 317 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 POLR2HP52434 150 aaKnown RBP11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 PKNOX1P55347 436 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 RPS26P62854 115 aaKnown RBP11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 PLAURQ03405 335 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 LCP2Q13094 533 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 TSTQ16762 297 aaKnown RBP11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 PRAMEF8Q5VWM4 474 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 PRAMEF7Q5VXH5 474 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 HMGN2P46Q86SG4 172 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 SLC35F6Q8N357 371 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 CCL17Q92583 94 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 ADPRHL2Q9NX46 363 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 NKIRAS2Q9NYR9 191 aa11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 POLR3KQ9Y2Y1 108 aaPredicted RBP11.55□□□□□ -0.56
EXOSC3-207ENST00000490516 TRAV40A0A0B4J280 105 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 AGAP5A6NIR3 686 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 H0YL77 283 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 PIP5K1CO60331 668 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 SCN2BO60939 215 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 STX11O75558 287 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 OPN1MWP04001 364 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 CHRM4P08173 479 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 KRT16P08779 473 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 OPN1MW2P0DN77 364 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 OPN1MW3P0DN78 364 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 SDC1P18827 310 aa11.54□□□□□ -0.56
EXOSC3-207ENST00000490516 CD80P33681 288 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms