RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 FRS3O43559 492 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 FZD7O75084 574 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 NPIPB7O75200 414 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 UPK3AO75631 287 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 ZNF432O94892 652 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 PNPP00491 289 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 GAAP10253 952 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 SAGP10523 405 aaPredicted RBP7.05□□□□□ -1.28
USP39-216ENST00000490193 G6PDP11413 515 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 UQCRBP14927 111 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 KRT4P19013 534 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 UQCRC2P22695 453 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 SERPINB5P36952 375 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 GPR6P46095 362 aaPredicted RBP7.05□□□□□ -1.28
USP39-216ENST00000490193 TMEM33P57088 247 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 LMO4P61968 165 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 TUBA1BP68363 451 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 TUBA4AP68366 448 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 TXNL4AP83876 142 aaKnown RBP7.05□□□□□ -1.28
USP39-216ENST00000490193 HPCAP84074 193 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 ROR2Q01974 943 aaKnown RBP7.05□□□□□ -1.28
USP39-216ENST00000490193 EMX2Q04743 252 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 SNTB2Q13425 540 aaKnown RBP7.05□□□□□ -1.28
USP39-216ENST00000490193 DAG1Q14118 895 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 SMU1Q2TAY7 513 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 PGS1Q32NB8 556 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 GPAT3Q53EU6 434 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 AWAT1Q58HT5 328 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 REP15Q6BDI9 236 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 NIPAL3Q6P499 406 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 TNFAIP8L2Q6P589 184 aaPredicted RBP7.05□□□□□ -1.28
USP39-216ENST00000490193 C1orf229Q6ZS94 237 aaPredicted RBP7.05□□□□□ -1.28
USP39-216ENST00000490193 TUBA1AQ71U36 451 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 GPAT4Q86UL3 456 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 EPHX4Q8IUS5 362 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 CCDC36Q8IYA8 594 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 ZNF440Q8IYI8 595 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 C17orf53Q8N3J3 647 aaPredicted RBP7.05□□□□□ -1.28
USP39-216ENST00000490193 MNS1Q8NEH6 495 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 OR4A15Q8NGL6 344 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 OR51F2Q8NH61 342 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 MRPL24Q96A35 216 aaKnown RBP7.05□□□□□ -1.28
USP39-216ENST00000490193 ZIM3Q96PE6 472 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 TRNT1Q96Q11 434 aaKnown RBP7.05□□□□□ -1.28
USP39-216ENST00000490193 LRRC37BQ96QE4 947 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 ZNF747Q9BV97 191 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 MS4A5Q9H3V2 200 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 NOX3Q9HBY0 568 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 G6PC2Q9NQR9 355 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 NOP53Q9NZM5 478 aaKnown RBP7.05□□□□□ -1.28
USP39-216ENST00000490193 RASD1Q9Y272 281 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 CMAHPQ9Y471 501 aa7.05□□□□□ -1.28
USP39-216ENST00000490193 A0A096LPI6 279 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 PRSS51A0A1B0GVH4 220 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 SH3PXD2BA1X283 911 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 A8MVM7 634 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 FTCDNL1E5RQL4 147 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 HMGN4O00479 90 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 TMPRSS2O15393 492 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 RP2O75695 350 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 HPXP02790 462 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 GSNP06396 782 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 TFPTP0C1Z6 253 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 FAM153BP0C7A2 387 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 NR4A1P22736 598 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 CXCR1P25024 350 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 ALDH3A1P30838 453 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 ARRB2P32121 409 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 ARF1P84077 181 aaKnown RBP7.04□□□□□ -1.28
USP39-216ENST00000490193 GNA13Q14344 377 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 MSMPQ1L6U9 139 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 MRPL2Q5T653 305 aaKnown RBP7.04□□□□□ -1.28
USP39-216ENST00000490193 ANXA8L1Q5VT79 327 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 PRAMEF8Q5VWM4 474 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 PRAMEF7Q5VXH5 474 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 SHISA2Q6UWI4 295 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 LRRC74BQ6ZQY2 392 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 C1QL2Q7Z5L3 287 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 HMGN2P46Q86SG4 172 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 LSRQ86X29 649 aaPredicted RBP7.04□□□□□ -1.28
USP39-216ENST00000490193 CARM1Q86X55 608 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 RNF217Q8TC41 542 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 RDH5Q92781 318 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 TESCQ96BS2 214 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 TUBGCP3Q96CW5 907 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 ZNF416Q9BWM5 594 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 TAPBPLQ9BX59 468 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 SUCNR1Q9BXA5 334 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 MRPL37Q9BZE1 423 aaKnown RBP7.04□□□□□ -1.28
USP39-216ENST00000490193 TPK1Q9H3S4 243 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 ZNF385DQ9H6B1 395 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 MTHFD2LQ9H903 347 aaPredicted RBP7.04□□□□□ -1.28
USP39-216ENST00000490193 ADPRHL2Q9NX46 363 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 B3GNT2Q9NY97 397 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 REV1Q9UBZ9 1251 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 VWFP04275 2813 aa7.04□□□□□ -1.28
USP39-216ENST00000490193 CDHR4A6H8M9 788 aa7.03□□□□□ -1.28
USP39-216ENST00000490193 J3QLI3 93 aa7.03□□□□□ -1.28
USP39-216ENST00000490193 WNT9BO14905 357 aa7.03□□□□□ -1.28
USP39-216ENST00000490193 SKAP2O75563 359 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms