RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ABHD12BQ7Z5M8 362 aaPredicted RBP16.91■□□□□ 0.3
TNFRSF1B-202ENST00000489921 HIPK1Q86Z02 1210 aa16.91■□□□□ 0.3
TNFRSF1B-202ENST00000489921 GOLGA6L1Q8N7Z2 621 aa16.91■□□□□ 0.3
TNFRSF1B-202ENST00000489921 SPDL1Q96EA4 605 aa16.91■□□□□ 0.3
TNFRSF1B-202ENST00000489921 SLC38A2Q96QD8 506 aa16.91■□□□□ 0.3
TNFRSF1B-202ENST00000489921 C12orf10Q9HB07 376 aa16.91■□□□□ 0.3
TNFRSF1B-202ENST00000489921 OBP2BQ9NPH6 170 aa16.91■□□□□ 0.3
TNFRSF1B-202ENST00000489921 CCDC167Q9P0B6 97 aa16.91■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ARPC4-TTLL3A0A0A6YYG9 625 aa16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 A0A1B0GWA3 101 aa16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ZNF587BE7ETH6 402 aa16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 POLR3GO15318 223 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 TPST2O60704 377 aa16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 TP53P04637 393 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 DSCR9P59020 149 aa16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 LOXL1Q08397 574 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 DHRS4L2Q6PKH6 230 aa16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 CLEC2AQ6UVW9 174 aa16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 MAGEE2Q8TD90 523 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 C10orf105Q8TEF2 133 aa16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 ZNF837Q96EG3 531 aaPredicted RBP16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 TNFRSF13CQ96RJ3 184 aa16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 CCDC28BQ9BUN5 200 aa16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 SEC61A2Q9H9S3 476 aa16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 YAE1D1Q9NRH1 226 aa16.9■□□□□ 0.3
TNFRSF1B-202ENST00000489921 A0A096LPE4 126 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 A0A1W2PPZ6 126 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 OR6C65A6NJZ3 312 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 RPL36A-HNRNPH2H7BZ11 118 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 KRT33AO76009 404 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 IGLV1-44P01699 117 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 GPX2P18283 190 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 EFNA4P52798 201 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CLDN17P56750 224 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 TUBA1BP68363 451 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 TUBA4AP68366 448 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CDK6Q00534 326 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 TMEM249Q2WGJ8 235 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 GCNT6Q5T4J0 391 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 REEP3Q6NUK4 255 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ANKRD16Q6P6B7 361 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 KLHL24Q6TFL4 600 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 DLEU7Q6UYE1 221 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 NHLRC1Q6VVB1 395 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 TUBA1AQ71U36 451 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 MYPOPQ86VE0 399 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 OXGR1Q96P68 337 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 RCE1Q9Y256 329 aa16.89■□□□□ 0.29
TNFRSF1B-202ENST00000489921 LOC102725191A0A1B0GVB3 256 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ZNF503-AS2A6NEH8 195 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 C5orf58C9J3I9 102 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 MS4A18H0YCH9 400 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 M0R082 166 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 F12P00748 615 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CALCRP30988 508 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 AQP5P55064 265 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 STX1BP61266 288 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ROR2Q01974 943 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CHRNB3Q05901 458 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 MS4A18Q3C1V0 323 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 C3orf36Q3SXR2 165 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 TTMPQ5BVD1 217 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 C6orf52Q5T4I8 152 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CXXC5Q7LFL8 322 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 WDFY1Q8IWB7 410 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ANKK1Q8NFD2 765 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ZNF417Q8TAU3 575 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 LRRC8CQ8TDW0 803 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 FAM168AQ92567 244 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 SLC38A4Q969I6 547 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 FBXO17Q96EF6 278 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ZNF587Q96SQ5 575 aaPredicted RBP16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 KATNB1Q9BVA0 655 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 TMEM38AQ9H6F2 299 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CACYBPQ9HB71 228 aaKnown RBP16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 STAB1Q9NY15 2570 aa16.88■□□□□ 0.29
TNFRSF1B-202ENST00000489921 VWC2LB2RUY7 222 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 TRAF3IP2O43734 574 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 HPRP00739 348 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 IGKV3-15P01624 115 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CECR9P0C854 216 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 SLC25A16P16260 332 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ZNF43P17038 809 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 GRPRP30550 384 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ARF1P84077 181 aaKnown RBP16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 VLDLRP98155 873 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 NAAAQ02083 359 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 PHYHD1Q5SRE7 291 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 FAM69AQ5T7M9 428 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 H1FNTQ75WM6 255 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 TMEM123Q8N131 208 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 FAM169BQ8N8A8 192 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 DNAJA4Q8WW22 397 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 SLC41A3Q96GZ6 507 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 SORCS2Q96PQ0 1159 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 ZNF317Q96PQ6 595 aaPredicted RBP16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 OR2M2Q96R28 347 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 GPR35Q9HC97 309 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 CA10Q9NS85 328 aa16.87■□□□□ 0.29
TNFRSF1B-202ENST00000489921 KLHL14Q9P2G3 628 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms