RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 HMGB1P1B2RPK0 211 aaPredicted RBP10.3□□□□□ -0.76
SRSF4-204ENST00000489898 RNF223E7ERA6 249 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 RPL36A-HNRNPH2H7BZ11 118 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 M0R3H8 397 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 LGI1O95970 557 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 CELA3BP08861 270 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 FUT4P22083 530 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 CXCR1P25024 350 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 CALCRP30988 508 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 TTKP33981 857 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 RPS5P46782 204 aaKnown RBP10.3□□□□□ -0.76
SRSF4-204ENST00000489898 SCARB2Q14108 478 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 GNA13Q14344 377 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 DUSP7Q16829 419 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 ZSWIM7Q19AV6 140 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 SWI5Q1ZZU3 235 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 CLEC12BQ2HXU8 276 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 TBRG1Q3YBR2 411 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 AGKQ53H12 422 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 HSP90B2PQ58FF3 399 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 REEP3Q6NUK4 255 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 DHDDSQ86SQ9 333 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 CALHM3Q86XJ0 350 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 RBM45Q8IUH3 476 aaKnown RBP10.3□□□□□ -0.76
SRSF4-204ENST00000489898 OR10H5Q8NGA6 315 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 HTRA1Q92743 480 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 TAMM41Q96BW9 452 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 BDH2Q9BUT1 245 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 KAT8Q9H7Z6 458 aaKnown RBP10.3□□□□□ -0.76
SRSF4-204ENST00000489898 TESQ9UGI8 421 aaKnown RBP10.3□□□□□ -0.76
SRSF4-204ENST00000489898 USP22Q9UPT9 525 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 RCE1Q9Y256 329 aa10.3□□□□□ -0.76
SRSF4-204ENST00000489898 A0A087WUJ7 227 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 LOC102725191A0A1B0GVB3 256 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 MS4A18H0YCH9 400 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 H7C417 338 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 IGKV3-15P01624 115 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 OPN1SWP03999 348 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 UQCRBP14927 111 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 PTAFRP25105 342 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 AQP1P29972 269 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 GRPRP30550 384 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 TUBA1BP68363 451 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 TUBA4AP68366 448 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 ETFDHQ16134 617 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 MS4A18Q3C1V0 323 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 FAM91A1Q658Y4 838 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 OR7E24Q6IFN5 339 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 TUBA1AQ71U36 451 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 SSX8Q7RTT4 187 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 AAED1Q7RTV5 226 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 UBE2J2Q8N2K1 259 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 OR6T1Q8NGN1 323 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 MAGEE2Q8TD90 523 aaPredicted RBP10.29□□□□□ -0.76
SRSF4-204ENST00000489898 OR2M2Q96R28 347 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 CGREF1Q99674 301 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 DHRS9Q9BPW9 319 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 PRSS27Q9BQR3 290 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 NAA11Q9BSU3 229 aaPredicted RBP10.29□□□□□ -0.76
SRSF4-204ENST00000489898 C1QTNF6Q9BXI9 259 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 CACNG6Q9BXT2 260 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 PCDHAC1Q9H158 963 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 RAD21L1Q9H4I0 556 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 NGBQ9NPG2 151 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 INTS9Q9NV88 658 aaKnown RBP10.29□□□□□ -0.76
SRSF4-204ENST00000489898 AMDHD2Q9Y303 409 aa10.29□□□□□ -0.76
SRSF4-204ENST00000489898 M0R1B8 84 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 LY6HO94772 140 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 AHSA1O95433 338 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 CECR9P0C854 216 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 PCGF2P35227 344 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 CDH12P55289 794 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 STX1BP61266 288 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 FAM69AQ5T7M9 428 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 TMEM108Q6UXF1 575 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 ZNF627Q7L945 461 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 GPAT4Q86UL3 456 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 POMGNT2Q8NAT1 580 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 HIPK4Q8NE63 616 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 OR6S1Q8NH40 331 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 NANOS1Q8WY41 292 aaKnown RBP10.28□□□□□ -0.76
SRSF4-204ENST00000489898 MUCL1Q96DR8 90 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 NPHS2Q9NP85 383 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 CBLN4Q9NTU7 201 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 RASD1Q9Y272 281 aa10.28□□□□□ -0.76
SRSF4-204ENST00000489898 TRAV36DV7A0A075B6V5 113 aa10.27□□□□□ -0.77
SRSF4-204ENST00000489898 CIB4A0PJX0 185 aa10.27□□□□□ -0.77
SRSF4-204ENST00000489898 VWC2LB2RUY7 222 aa10.27□□□□□ -0.77
SRSF4-204ENST00000489898 GPRIN2O60269 458 aa10.27□□□□□ -0.77
SRSF4-204ENST00000489898 FMO6PO60774 539 aa10.27□□□□□ -0.77
SRSF4-204ENST00000489898 VAMP5O95183 116 aa10.27□□□□□ -0.77
SRSF4-204ENST00000489898 PPIBP23284 216 aaKnown RBP10.27□□□□□ -0.77
SRSF4-204ENST00000489898 HGFACQ04756 655 aa10.27□□□□□ -0.77
SRSF4-204ENST00000489898 VEZF1Q14119 521 aa10.27□□□□□ -0.77
SRSF4-204ENST00000489898 OR1Q1Q15612 314 aa10.27□□□□□ -0.77
SRSF4-204ENST00000489898 ALG10BQ5I7T1 473 aa10.27□□□□□ -0.77
SRSF4-204ENST00000489898 C1QTNF12Q5T7M4 302 aa10.27□□□□□ -0.77
SRSF4-204ENST00000489898 NIPAL3Q6P499 406 aa10.27□□□□□ -0.77
SRSF4-204ENST00000489898 SLC46A3Q7Z3Q1 461 aa10.27□□□□□ -0.77
SRSF4-204ENST00000489898 MUC15Q8N387 334 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms