RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 LRRN3E7EW58 273 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 M0QX08 132 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 IGHV4-39P01824 125 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 PTAFRP25105 342 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 CDH12P55289 794 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 PCBP3P57721 371 aaKnown RBP12.27□□□□□ -0.45
VTI1A-206ENST00000489142 NPTX1Q15818 432 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 ULK3Q6PHR2 472 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 RBM45Q8IUH3 476 aaKnown RBP12.27□□□□□ -0.45
VTI1A-206ENST00000489142 C1orf162Q8NEQ5 155 aaPredicted RBP12.27□□□□□ -0.45
VTI1A-206ENST00000489142 OR4D11Q8NGI4 311 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 DNAJA4Q8WW22 397 aaPredicted RBP12.27□□□□□ -0.45
VTI1A-206ENST00000489142 HTRA1Q92743 480 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 SLC47A1Q96FL8 570 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 MCHR1Q99705 422 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 SIKE1Q9BRV8 207 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 BDH2Q9BUT1 245 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 TRAF4Q9BUZ4 470 aaPredicted RBP12.27□□□□□ -0.45
VTI1A-206ENST00000489142 ALG2Q9H553 416 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 KAT8Q9H7Z6 458 aaKnown RBP12.27□□□□□ -0.45
VTI1A-206ENST00000489142 C12orf10Q9HB07 376 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 TMEM27Q9HBJ8 222 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 SELENONQ9NZV5 590 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 PRDM4Q9UKN5 801 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 USP22Q9UPT9 525 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 AMDHD2Q9Y303 409 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 CR1P17927 2039 aa12.27□□□□□ -0.45
VTI1A-206ENST00000489142 A0A087WUJ7 227 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 CPSF4LA6NMK7 179 aaKnown RBP12.26□□□□□ -0.45
VTI1A-206ENST00000489142 ATP6V1G2-DDX39BF2Z307 99 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 AIM2O14862 343 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 VAMP5O95183 116 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 HPRP00739 348 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 VIMP08670 466 aaKnown RBP12.26□□□□□ -0.45
VTI1A-206ENST00000489142 TROVE2P10155 538 aaKnown RBP eCLIP12.26□□□□□ -0.45
VTI1A-206ENST00000489142 HLA-DOBP13765 273 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 NQO1P15559 274 aaKnown RBP12.26□□□□□ -0.45
VTI1A-206ENST00000489142 ZNF43P17038 809 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 PCGF2P35227 344 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 ACVR1BP36896 505 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 ARFIP2P53365 341 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 GUCY1A3Q02108 690 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 TGFBR3Q03167 851 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 TNK1Q13470 666 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 C1DQ13901 141 aaKnown RBP12.26□□□□□ -0.45
VTI1A-206ENST00000489142 VEZF1Q14119 521 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 CLEC12BQ2HXU8 276 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 TBRG1Q3YBR2 411 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 RABL3Q5HYI8 236 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 FAM69AQ5T7M9 428 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 CARD17Q5XLA6 110 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 FAM91A1Q658Y4 838 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 KLHL24Q6TFL4 600 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 NET1Q7Z628 596 aaPredicted RBP12.26□□□□□ -0.45
VTI1A-206ENST00000489142 RANBP3LQ86VV4 465 aaPredicted RBP12.26□□□□□ -0.45
VTI1A-206ENST00000489142 WDFY1Q8IWB7 410 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 C17orf78Q8N4C9 275 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 C10orf53Q8N6V4 93 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 OR1K1Q8NGR3 316 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 TAMM41Q96BW9 452 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 RADILQ96JH8 1075 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 OXGR1Q96P68 337 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 MOGAT1Q96PD6 335 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 ARHGDIGQ99819 225 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 ATP23Q9Y6H3 246 aa12.26□□□□□ -0.45
VTI1A-206ENST00000489142 NSD1Q96L73 2696 aaPredicted RBP12.26□□□□□ -0.45
VTI1A-206ENST00000489142 MS4A18H0YCH9 400 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 SERPINI2O75830 405 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 SEC14L2O76054 403 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 BGLAPP02818 100 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 HEXAP06865 529 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 CD247P20963 164 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 GZMMP51124 257 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 FABP6P51161 128 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 PRPS1P60891 318 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 ROR2Q01974 943 aaKnown RBP12.25□□□□□ -0.45
VTI1A-206ENST00000489142 RBBP4Q09028 425 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 KLF10Q13118 480 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 TRMT5Q32P41 509 aaKnown RBP12.25□□□□□ -0.45
VTI1A-206ENST00000489142 MS4A18Q3C1V0 323 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 ENTPD8Q5MY95 495 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 METTL21CQ5VZV1 264 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 REP15Q6BDI9 236 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 NANOGP8Q6NSW7 305 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 WDR88Q6ZMY6 472 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 H1FNTQ75WM6 255 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-206ENST00000489142 SSX8Q7RTT4 187 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 ABHD12BQ7Z5M8 362 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-206ENST00000489142 DTX2Q86UW9 622 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 TSPYL5Q86VY4 417 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-206ENST00000489142 SNX32Q86XE0 403 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 BHLHE22Q8NFJ8 381 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-206ENST00000489142 OR6T1Q8NGN1 323 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 TSPEARQ8WU66 669 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 ZNF837Q96EG3 531 aaPredicted RBP12.25□□□□□ -0.45
VTI1A-206ENST00000489142 TRMT61AQ96FX7 289 aaKnown RBP12.25□□□□□ -0.45
VTI1A-206ENST00000489142 DHRS9Q9BPW9 319 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 NANOGQ9H9S0 305 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 FAIMQ9NVQ4 179 aa12.25□□□□□ -0.45
VTI1A-206ENST00000489142 MOKQ9UQ07 419 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms