RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 CRYBB1P53674 252 aaPredicted RBP1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 DLX1P56177 255 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 SEC61GP60059 68 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 TNFRSF17Q02223 184 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 ACVR1Q04771 509 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 PSG5Q15238 335 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 ATP6AP1Q15904 470 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 MICBQ29980 383 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 ZNF658BQ4V348 819 aaPredicted RBP1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 SAMD4BQ5PRF9 694 aaKnown RBP1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 MARCH8Q5T0T0 291 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 OR2A2Q6IF42 318 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 HSDL2Q6YN16 418 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 GDPD3Q7L5L3 318 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 ZNF546Q86UE3 836 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 PAQR7Q86WK9 346 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 MKXQ8IYA7 352 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 PIANPQ8IYJ0 282 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 FAM71E2Q8N5Q1 922 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 EIF1ADQ8N9N8 165 aaKnown RBP1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 SDR9C7Q8NEX9 313 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 OR6C4Q8NGE1 309 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 OR1L4Q8NGR5 311 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 TMEM158Q8WZ71 300 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 RNF185Q96GF1 192 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 RPRD1AQ96P16 312 aaPredicted RBP1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 CLCC1Q96S66 551 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 FMO2Q99518 471 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 COPS8Q99627 209 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 NRTNQ99748 197 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 OR11A1Q9GZK7 315 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 DEFB127Q9H1M4 99 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 NHEJ1Q9H9Q4 299 aaPredicted RBP1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 EML4Q9HC35 981 aaKnown RBP1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 MCCC2Q9HCC0 563 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 ZNF225Q9UK10 706 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 ASB3Q9Y575 518 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 CACNG2Q9Y698 323 aa1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 DDX49Q9Y6V7 483 aaKnown RBP1.84□□□□□ -2.11
R3HDM1-219ENST00000488035 ATAD2BQ9ULI0 1458 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 A0A1W2PPV9 198 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 C12orf77C9JDV5 145 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 IGHDP01880 384 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 GIPP09681 153 aaPredicted RBP1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 DBTP11182 482 aaKnown RBP1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 PRDX3P30048 256 aaKnown RBP1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 FMO3P31513 532 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 LHX2P50458 406 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 CRISP3P54108 245 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 ASPHQ12797 758 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 PDIA2Q13087 525 aaKnown RBP1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 EIF4EBP2Q13542 120 aaPredicted RBP1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 OR5I1Q13606 314 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 CAPRIN1Q14444 709 aaKnown RBP1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 KIAA0087Q14695 138 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 KLHL38Q2WGJ6 581 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 FILIP1LQ4L180 1135 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 BOLA3Q53S33 107 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 GPR157Q5UAW9 335 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 C6orf89Q6UWU4 347 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 COX15Q7KZN9 410 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 THOC6Q86W42 341 aaKnown RBP1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 ACER1Q8TDN7 264 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 NDRG1Q92597 394 aaKnown RBP1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 LRRC58Q96CX6 371 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 CXorf40BQ96DE9 158 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 ZNF641Q96N77 438 aaPredicted RBP1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 OR2M2Q96R28 347 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 PANX2Q96RD6 677 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 NRIP2Q9BQI9 281 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 TMEM246Q9BRR3 403 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 FAIM2Q9BWQ8 316 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 ROPN1BQ9BZX4 212 aaPredicted RBP1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 SRMSQ9H3Y6 488 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 LY9Q9HBG7 655 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 C6orf203Q9P0P8 240 aaPredicted RBP1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 TRAPPC4Q9Y296 219 aa1.83□□□□□ -2.12
R3HDM1-219ENST00000488035 A0A1B0GUA9 196 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 A6NDX4 124 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 OR5B21A6NL26 309 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 FAM166BA8MTA8 275 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 FCMRO60667 390 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 TOM1O60784 492 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 CLDN9O95484 217 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 C1orf105O95561 183 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 TSPAN12O95859 305 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 MMP1P03956 469 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 ETS2P15036 469 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 CCNCP24863 283 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 GLP1RP43220 463 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 ARRB1P49407 418 aaPredicted RBP1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 CCR6P51684 374 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 SH3BGRP55822 239 aaPredicted RBP1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 MECOMQ03112 1051 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 GK3PQ14409 553 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 CYB5R2Q6BCY4 276 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 Q6P435 159 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 ZNF621Q6ZSS3 439 aa1.82□□□□□ -2.12
R3HDM1-219ENST00000488035 EFL1Q7Z2Z2 1120 aaKnown RBP1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms