RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 PNO1Q9NRX1 252 aaKnown RBP23.82■■□□□ 1.4
HLA-C-208ENST00000487245 PTTG3PQ9NZH4 202 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 SLC6A5Q9Y345 797 aa23.82■■□□□ 1.4
HLA-C-208ENST00000487245 NAA10P41227 235 aaPredicted RBP23.81■■□□□ 1.4
HLA-C-208ENST00000487245 GNG2P59768 71 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 ANGPT1Q15389 498 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 FCN2Q15485 313 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 UBE2NLQ5JXB2 153 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 BCL2L15Q5TBC7 163 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 LYPD4Q6UWN0 246 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 KRT74Q7RTS7 529 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 SIAH3Q8IW03 269 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 LRRC17Q8N6Y2 441 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 BRD7Q9NPI1 651 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 GNG8Q9UK08 70 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 COPS3Q9UNS2 423 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 ADAM18Q9Y3Q7 739 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 RNF215Q9Y6U7 377 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 FRG2CA6NGY1 282 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 PDCD5O14737 125 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 GLCEO94923 617 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 STOMP27105 288 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 ATG4DQ86TL0 474 aaPredicted RBP23.81■■□□□ 1.4
HLA-C-208ENST00000487245 OR4D9Q8NGE8 314 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 NDEL1Q9GZM8 345 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 NUDT15Q9NV35 164 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 STMN3Q9NZ72 180 aa23.81■■□□□ 1.4
HLA-C-208ENST00000487245 OR6C68A6NDL8 312 aa23.8■■□□□ 1.4
HLA-C-208ENST00000487245 APEHP13798 732 aaKnown RBP23.8■■□□□ 1.4
HLA-C-208ENST00000487245 SRP9P49458 86 aaKnown RBP23.8■■□□□ 1.4
HLA-C-208ENST00000487245 ARL4DP49703 201 aa23.8■■□□□ 1.4
HLA-C-208ENST00000487245 SLC25A1P53007 311 aa23.8■■□□□ 1.4
HLA-C-208ENST00000487245 DCAF7P61962 342 aa23.8■■□□□ 1.4
HLA-C-208ENST00000487245 DGCR2P98153 550 aa23.8■■□□□ 1.4
HLA-C-208ENST00000487245 RPL6Q02878 288 aaKnown RBP23.8■■□□□ 1.4
HLA-C-208ENST00000487245 ZNF684Q5T5D7 378 aa23.8■■□□□ 1.4
HLA-C-208ENST00000487245 SLC22A10Q63ZE4 541 aa23.8■■□□□ 1.4
HLA-C-208ENST00000487245 PHOSPHO1Q8TCT1 267 aa23.8■■□□□ 1.4
HLA-C-208ENST00000487245 ZNRF4Q8WWF5 429 aa23.8■■□□□ 1.4
HLA-C-208ENST00000487245 LCORQ96JN0 433 aaPredicted RBP23.8■■□□□ 1.4
HLA-C-208ENST00000487245 OR14A2Q96R54 314 aa23.8■■□□□ 1.4
HLA-C-208ENST00000487245 PLEKHA1Q9HB21 404 aa23.8■■□□□ 1.4
HLA-C-208ENST00000487245 MAGEB4O15481 346 aaPredicted RBP23.79■■□□□ 1.4
HLA-C-208ENST00000487245 UTS2O95399 124 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 HSD11B2P80365 405 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 SKP2Q13309 424 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 KLF9Q13886 244 aaPredicted RBP23.79■■□□□ 1.4
HLA-C-208ENST00000487245 UBXN2BQ14CS0 331 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 FAM205BPQ63HN1 556 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 TTLL10Q6ZVT0 673 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 C9orf62Q8N4C0 152 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 OR51L1Q8NGJ5 315 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 SMIM4Q8WVI0 70 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 HSPA12BQ96MM6 686 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 NMNAT3Q96T66 252 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 TTTY10Q9BZA0 68 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 C12orf10Q9HB07 376 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 NUP210LQ5VU65 1888 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 IGKV1D-42A0A075B6H8 117 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 H3BMH7 237 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 ZNF264O43296 627 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 SELENOFO60613 162 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 CD3GP09693 182 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 NKAIN2Q5VXU1 208 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 SLC6A19Q695T7 634 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 ZNF782Q6ZMW2 699 aaPredicted RBP23.79■■□□□ 1.4
HLA-C-208ENST00000487245 BTN2A1Q7KYR7 527 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 NUP54Q7Z3B4 507 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 UBE2ZQ9H832 354 aaPredicted RBP23.79■■□□□ 1.4
HLA-C-208ENST00000487245 ING4Q9UNL4 249 aa23.79■■□□□ 1.4
HLA-C-208ENST00000487245 IGKV3D-11A0A0A0MRZ8 115 aa23.78■■□□□ 1.4
HLA-C-208ENST00000487245 TEX13CA0A0J9YWL9 993 aa23.78■■□□□ 1.4
HLA-C-208ENST00000487245 IMPA2O14732 288 aa23.78■■□□□ 1.4
HLA-C-208ENST00000487245 LINC01590Q5TEZ4 76 aa23.78■■□□□ 1.4
HLA-C-208ENST00000487245 SLC35F3Q8IY50 421 aa23.78■■□□□ 1.4
HLA-C-208ENST00000487245 CACNG6Q9BXT2 260 aa23.78■■□□□ 1.4
HLA-C-208ENST00000487245 ACTR6Q9GZN1 396 aa23.78■■□□□ 1.4
HLA-C-208ENST00000487245 NXF5Q9H1B4 397 aaKnown RBP23.78■■□□□ 1.4
HLA-C-208ENST00000487245 OR51J1Q9H342 316 aa23.78■■□□□ 1.4
HLA-C-208ENST00000487245 RANBP3Q9H6Z4 567 aaPredicted RBP23.78■■□□□ 1.4
HLA-C-208ENST00000487245 HIF3AQ9Y2N7 669 aa23.78■■□□□ 1.4
HLA-C-208ENST00000487245 ZNF281Q9Y2X9 895 aa23.78■■□□□ 1.4
HLA-C-208ENST00000487245 AK6Q9Y3D8 172 aaKnown RBP23.78■■□□□ 1.4
HLA-C-208ENST00000487245 LOC105378220A0A1B0GUY1 285 aaPredicted RBP23.77■■□□□ 1.4
HLA-C-208ENST00000487245 AKR7A2O43488 359 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 PIAS2O75928 621 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 SRMP19623 302 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 SLC6A8P48029 635 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 ELAVL1Q15717 326 aaKnown RBP23.77■■□□□ 1.4
HLA-C-208ENST00000487245 CD226Q15762 336 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 KCTD20Q7Z5Y7 419 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 PLXDC1Q8IUK5 500 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 EXD3Q8N9H8 876 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 LRRC75AQ8NAA5 344 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 LGALS14Q8TCE9 139 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 MRI1Q9BV20 369 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 LAT2Q9GZY6 243 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 EMC3Q9P0I2 261 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 MOKQ9UQ07 419 aa23.77■■□□□ 1.4
HLA-C-208ENST00000487245 TRAV6A0A075B6T7 132 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms