RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 TPK1Q9H3S4 243 aa16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 METTL17Q9H7H0 456 aaPredicted RBP16.8■□□□□ 0.28
SMPDL3A-202ENST00000487215 RPL36A-HNRNPH2H7BZ11 118 aa16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 TYROBPO43914 113 aa16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 ADRA2AP08913 450 aa16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 TFPTP0C1Z6 253 aa16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 COPZ1P61923 177 aa16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 IL1RL1Q01638 556 aa16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 NPRL3Q12980 569 aa16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 SNTB2Q13425 540 aaKnown RBP16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 KDM8Q8N371 416 aa16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 TRIML2Q8N7C3 387 aa16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 OR52P1PQ8NH57 321 aa16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 AENQ8WTP8 325 aaKnown RBP16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 ZFAND2BQ8WV99 257 aa16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 PKNOX2Q96KN3 472 aa16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 TEX37Q96LM6 180 aa16.79■□□□□ 0.28
SMPDL3A-202ENST00000487215 DSPPQ9NZW4 1301 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 A0A0A6YYJ9 748 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 B4DSR2 109 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 FTCDNL1E5RQL4 147 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 SLCO1B7G3V0H7 640 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 BIRC5O15392 142 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 ZNF432O94892 652 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 MYZAPP0CAP1 466 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 PNMTP11086 282 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 PRG2P13727 222 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 ARR3P36575 388 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 NME5P56597 212 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 CLDN17P56750 224 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 LIN52Q52LA3 116 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 DEF8Q6ZN54 512 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 MDP1Q86V88 176 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 GLCCI1Q86VQ1 547 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 ANKK1Q8NFD2 765 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 NOX3Q9HBY0 568 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 PRDM4Q9UKN5 801 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 RCE1Q9Y256 329 aa16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.78■□□□□ 0.28
SMPDL3A-202ENST00000487215 TENM1Q9UKZ4 2725 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 A0A096LPI6 279 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 AHSA1O95433 338 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 SERPINE1P05121 402 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 GSNP06396 782 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 LBPP18428 481 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 ABCE1P61221 599 aaKnown RBP16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 POU3F1Q03052 451 aaPredicted RBP16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 DAG1Q14118 895 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 MSMPQ1L6U9 139 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 KRT80Q6KB66 452 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 WDR93Q6P2C0 686 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 ZNF621Q6ZSS3 439 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 MFSD8Q8NHS3 518 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 STK35Q8TDR2 534 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 SLC25A36Q96CQ1 311 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 ZNF837Q96EG3 531 aaPredicted RBP16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 PTDSS2Q9BVG9 487 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 C20orf27Q9GZN8 174 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 CRLF2Q9HC73 371 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 GPR35Q9HC97 309 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 SSU72Q9NP77 194 aaKnown RBP16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 SEC14L4Q9UDX3 406 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 ZNF443Q9Y2A4 671 aaPredicted RBP16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 RAP2CQ9Y3L5 183 aa16.77■□□□□ 0.28
SMPDL3A-202ENST00000487215 WDR91A4D1P6 747 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 SLC43A1O75387 559 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 ZNF43P17038 809 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 NCF2P19878 526 aaPredicted RBP16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 UFM1P61960 85 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 CHI3L2Q15782 390 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 CEACAM16Q2WEN9 425 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 ELFN2Q5R3F8 820 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 RNF220Q5VTB9 566 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 ATG16L1Q676U5 607 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 LRRC34Q8IZ02 419 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 CLIP4Q8N3C7 705 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 IL17RDQ8NFM7 739 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 CLDND2Q8NHS1 167 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 NUF2Q9BZD4 464 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 MRPL37Q9BZE1 423 aaKnown RBP16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 B3GAT1Q9P2W7 334 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 P2RX2Q9UBL9 471 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 CMAHPQ9Y471 501 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 CHST2Q9Y4C5 530 aa16.76■□□□□ 0.27
SMPDL3A-202ENST00000487215 TM9SF1O15321 606 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 RGS16O15492 202 aaPredicted RBP16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 SEC14L2O76054 403 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 ALDOCP09972 364 aaKnown RBP16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 IL12AP29459 219 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 RPS5P46782 204 aaKnown RBP16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 CAPZA2P47755 286 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 RPL14P50914 215 aaKnown RBP16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 ACTG1P63261 375 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 KRT71Q3SY84 523 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 SERPINA11Q86U17 422 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 CARM1Q86X55 608 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 GPR137CQ8N3F9 429 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 MREGQ8N565 214 aa16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 MRPL24Q96A35 216 aaKnown RBP16.75■□□□□ 0.27
SMPDL3A-202ENST00000487215 TMEM186Q96B77 213 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms