RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 A0A1B0GWA3 101 aa21.4■■□□□ 1.02
LIME1-206ENST00000487026 TLX2O43763 284 aaPredicted RBP21.4■■□□□ 1.02
LIME1-206ENST00000487026 ZNF43P17038 809 aa21.4■■□□□ 1.02
LIME1-206ENST00000487026 PRKAR1BP31321 381 aa21.4■■□□□ 1.02
LIME1-206ENST00000487026 DSCR9P59020 149 aa21.4■■□□□ 1.02
LIME1-206ENST00000487026 UBE2NP61088 152 aaKnown RBP21.4■■□□□ 1.02
LIME1-206ENST00000487026 CDK6Q00534 326 aa21.4■■□□□ 1.02
LIME1-206ENST00000487026 MST1LQ2TV78 715 aa21.4■■□□□ 1.02
LIME1-206ENST00000487026 AGKQ53H12 422 aa21.4■■□□□ 1.02
LIME1-206ENST00000487026 REEP3Q6NUK4 255 aa21.4■■□□□ 1.02
LIME1-206ENST00000487026 NANOS1Q8WY41 292 aaKnown RBP21.4■■□□□ 1.02
LIME1-206ENST00000487026 SLC38A2Q96QD8 506 aa21.4■■□□□ 1.02
LIME1-206ENST00000487026 CCDC28BQ9BUN5 200 aa21.4■■□□□ 1.02
LIME1-206ENST00000487026 PMF1-BGLAPU3KQ54 211 aa21.4■■□□□ 1.02
LIME1-206ENST00000487026 M0R082 166 aa21.39■■□□□ 1.01
LIME1-206ENST00000487026 ROR2Q01974 943 aaKnown RBP21.39■■□□□ 1.01
LIME1-206ENST00000487026 C1QTNF12Q5T7M4 302 aa21.39■■□□□ 1.01
LIME1-206ENST00000487026 HMBOX1Q6NT76 420 aa21.39■■□□□ 1.01
LIME1-206ENST00000487026 C6orf89Q6UWU4 347 aa21.39■■□□□ 1.01
LIME1-206ENST00000487026 ZNF417Q8TAU3 575 aa21.39■■□□□ 1.01
LIME1-206ENST00000487026 FAM168AQ92567 244 aa21.39■■□□□ 1.01
LIME1-206ENST00000487026 OXGR1Q96P68 337 aa21.39■■□□□ 1.01
LIME1-206ENST00000487026 ZNF587Q96SQ5 575 aaPredicted RBP21.39■■□□□ 1.01
LIME1-206ENST00000487026 NELFAQ9H3P2 528 aa21.39■■□□□ 1.01
LIME1-206ENST00000487026 OBP2BQ9NPH6 170 aa21.39■■□□□ 1.01
LIME1-206ENST00000487026 B3GAT1Q9P2W7 334 aa21.39■■□□□ 1.01
LIME1-206ENST00000487026 COL6A5A8TX70 2615 aa21.39■■□□□ 1.01
LIME1-206ENST00000487026 IGKV1D-42A0A075B6H8 117 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 OR6C65A6NJZ3 312 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 ZNF432O94892 652 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 BMP4P12644 408 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 GRPRP30550 384 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 EFNA4P52798 201 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 ARF1P84077 181 aaKnown RBP21.38■■□□□ 1.01
LIME1-206ENST00000487026 IL1RL1Q01638 556 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 C1DQ13901 141 aaKnown RBP21.38■■□□□ 1.01
LIME1-206ENST00000487026 SWI5Q1ZZU3 235 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 TTMPQ5BVD1 217 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 ANKRD16Q6P6B7 361 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 DHRS4L2Q6PKH6 230 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 LSMEM1Q8N8F7 131 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 RNF217Q8TC41 542 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 TNFRSF13CQ96RJ3 184 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 WFDC6Q9BQY6 131 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 LINC00470Q9BZP3 86 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 SEC61A2Q9H9S3 476 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 C12orf10Q9HB07 376 aa21.38■■□□□ 1.01
LIME1-206ENST00000487026 CUBNO60494 3623 aa21.37■■□□□ 1.01
LIME1-206ENST00000487026 TRBV5-3A0A0A0MS03 114 aa21.37■■□□□ 1.01
LIME1-206ENST00000487026 PPIBP23284 216 aaKnown RBP21.37■■□□□ 1.01
LIME1-206ENST00000487026 AQP1P29972 269 aa21.37■■□□□ 1.01
LIME1-206ENST00000487026 SCARB2Q14108 478 aa21.37■■□□□ 1.01
LIME1-206ENST00000487026 TMEM249Q2WGJ8 235 aa21.37■■□□□ 1.01
LIME1-206ENST00000487026 ALG10BQ5I7T1 473 aa21.37■■□□□ 1.01
LIME1-206ENST00000487026 KRT73Q86Y46 540 aa21.37■■□□□ 1.01
LIME1-206ENST00000487026 SLC38A4Q969I6 547 aa21.37■■□□□ 1.01
LIME1-206ENST00000487026 ZNF837Q96EG3 531 aaPredicted RBP21.37■■□□□ 1.01
LIME1-206ENST00000487026 ATP6V1G3Q96LB4 118 aa21.37■■□□□ 1.01
LIME1-206ENST00000487026 KCNS3Q9BQ31 491 aa21.37■■□□□ 1.01
LIME1-206ENST00000487026 SPATA5L1Q9BVQ7 753 aa21.37■■□□□ 1.01
LIME1-206ENST00000487026 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.37■■□□□ 1.01
LIME1-206ENST00000487026 ARPC4-TTLL3A0A0A6YYG9 625 aa21.36■■□□□ 1.01
LIME1-206ENST00000487026 A8MV72 311 aaPredicted RBP21.36■■□□□ 1.01
LIME1-206ENST00000487026 AIM2O14862 343 aa21.36■■□□□ 1.01
LIME1-206ENST00000487026 OR2T1O43869 369 aa21.36■■□□□ 1.01
LIME1-206ENST00000487026 SLC43A1O75387 559 aa21.36■■□□□ 1.01
LIME1-206ENST00000487026 F12P00748 615 aaPredicted RBP21.36■■□□□ 1.01
LIME1-206ENST00000487026 LOXL1Q08397 574 aaPredicted RBP21.36■■□□□ 1.01
LIME1-206ENST00000487026 ADRM1Q16186 407 aa21.36■■□□□ 1.01
LIME1-206ENST00000487026 FAM69AQ5T7M9 428 aa21.36■■□□□ 1.01
LIME1-206ENST00000487026 VHLLQ6RSH7 139 aa21.36■■□□□ 1.01
LIME1-206ENST00000487026 H1FNTQ75WM6 255 aaPredicted RBP21.36■■□□□ 1.01
LIME1-206ENST00000487026 HIPK1Q86Z02 1210 aa21.36■■□□□ 1.01
LIME1-206ENST00000487026 C10orf105Q8TEF2 133 aa21.36■■□□□ 1.01
LIME1-206ENST00000487026 DNAJA4Q8WW22 397 aaPredicted RBP21.36■■□□□ 1.01
LIME1-206ENST00000487026 DYDC1Q8WWB3 177 aa21.36■■□□□ 1.01
LIME1-206ENST00000487026 THOC1Q96FV9 657 aaKnown RBP21.36■■□□□ 1.01
LIME1-206ENST00000487026 GPR35Q9HC97 309 aa21.36■■□□□ 1.01
LIME1-206ENST00000487026 RCE1Q9Y256 329 aa21.36■■□□□ 1.01
LIME1-206ENST00000487026 RTTNQ86VV8 2226 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 TRAV36DV7A0A075B6V5 113 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 TPST2O60704 377 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 CRYAAP02489 173 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 CELA3BP08861 270 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 CECR9P0C854 216 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 SLC25A16P16260 332 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 GPX2P18283 190 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 SLC6A2P23975 617 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 CALCRP30988 508 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 NAAAQ02083 359 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 OR1Q1Q15612 314 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 ULK3Q6PHR2 472 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 GPR137CQ8N3F9 429 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 MAGEE2Q8TD90 523 aaPredicted RBP21.35■■□□□ 1.01
LIME1-206ENST00000487026 TMEM38AQ9H6F2 299 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 KLHL14Q9P2G3 628 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 CRNNQ9UBG3 495 aaPredicted RBP21.35■■□□□ 1.01
LIME1-206ENST00000487026 GMEB1Q9Y692 573 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 ARFGEF3Q5TH69 2177 aa21.35■■□□□ 1.01
LIME1-206ENST00000487026 EVPLLA8MZ36 301 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms