RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 GALNT5Q7Z7M9 940 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 CD163Q86VB7 1156 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 SLC43A2Q8N370 569 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 OR5M9Q8NGP3 310 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 OR51A7Q8NH64 312 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 MOSPD2Q8NHP6 518 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 FNDC9Q8TBE3 224 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 ZHX1-C8orf76Q96EF9 292 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 RDH12Q96NR8 316 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 TNFRSF13CQ96RJ3 184 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 MBOAT4Q96T53 435 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 VCX3BQ9H321 246 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 EGLN3Q9H6Z9 239 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 ING1Q9UK53 422 aaPredicted RBP8.55□□□□□ -1.04
MCF2L-227ENST00000486806 MCTS1Q9ULC4 181 aaKnown RBP8.55□□□□□ -1.04
MCF2L-227ENST00000486806 RASD1Q9Y272 281 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 FAM215AQ9Y5M1 114 aa8.55□□□□□ -1.04
MCF2L-227ENST00000486806 IGSF10Q6WRI0 2623 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 IGKV3D-15A0A087WSY6 115 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 NPIPB13A6NJU9 1138 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 CD8B2A6NJW9 211 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 SLC22A20A6NK97 555 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 FIGNL2A6NMB9 653 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 ZNF716A6NP11 495 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 AHRRA9YTQ3 701 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 NPIPB4C9JG80 1138 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 MCIDASD6RGH6 385 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 MS4A18H0YCH9 400 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 H0YJX3 145 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 BLOC1S5-TXNDC5H3BN57 136 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 BHLHE40O14503 412 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 TRAF3IP2O43734 574 aaPredicted RBP8.54□□□□□ -1.04
MCF2L-227ENST00000486806 AQP8O94778 261 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 NDUFB2O95178 105 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 VAMP5O95183 116 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 RCBTB2O95199 551 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 SNAP29O95721 258 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 IGHMP01871 453 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 HIST1H2ABP04908 130 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 TPOP07202 933 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 ADORA3P0DMS8 318 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 FCGR2AP12318 317 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 GABRA1P14867 456 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 ABOP16442 354 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 EPHA2P29317 976 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 PTGER4P35408 488 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 VHLP40337 213 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 SLC16A1P53985 500 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 RAD23AP54725 363 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 AQP4P55087 323 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 ESRRGP62508 458 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 SLC17A1Q14916 467 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 PDK3Q15120 406 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 MS4A18Q3C1V0 323 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 ALG10Q5BKT4 473 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 NSUN5P2Q63ZY6 315 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 RTL6Q6ICC9 239 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 PLXDC2Q6UX71 529 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 SEM1Q6ZVN7 128 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 FCRLAQ7L513 359 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 HIST3H2AQ7L7L0 130 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 FAM122BQ7Z309 247 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 PXKQ7Z7A4 578 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 CCDC103Q8IW40 242 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 GALNT4Q8N4A0 578 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 ABHD3Q8WU67 409 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 ROBO4Q8WZ75 1007 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 HIST1H2ACQ93077 130 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 NAA11Q9BSU3 229 aaPredicted RBP8.54□□□□□ -1.04
MCF2L-227ENST00000486806 SF3B5Q9BWJ5 86 aaKnown RBP8.54□□□□□ -1.04
MCF2L-227ENST00000486806 GRIP2Q9C0E4 1043 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 ENKD1Q9H0I2 346 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 VCXQ9H320 206 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 TOR3AQ9H497 397 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 RNF122Q9H9V4 155 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 NRIP3Q9NQ35 241 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 TBC1D23Q9NUY8 699 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 SMPD3Q9NY59 655 aaPredicted RBP8.54□□□□□ -1.04
MCF2L-227ENST00000486806 ENOPH1Q9UHY7 261 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 SPTA1P02549 2419 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 MED12Q93074 2177 aa8.54□□□□□ -1.04
MCF2L-227ENST00000486806 CACNA1BQ00975 2339 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 MBD3L4A6NDZ8 208 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-227ENST00000486806 MBD3L3A6NE82 208 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-227ENST00000486806 MBD3L5A6NJ08 208 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-227ENST00000486806 ZAR1LA6NP61 321 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 H3BN98 237 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 PRRG2O14669 202 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 RNF13O43567 381 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 SYNGR4O95473 234 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 TGM6O95932 706 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 F13BP05160 661 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 CD14P08571 375 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 HLA-DOBP13765 273 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 APEHP13798 732 aaKnown RBP8.53□□□□□ -1.04
MCF2L-227ENST00000486806 CDH2P19022 906 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-227ENST00000486806 ACVR2AP27037 513 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 SLC6A6P31641 620 aa8.53□□□□□ -1.04
MCF2L-227ENST00000486806 POLR2IP36954 125 aaKnown RBP8.53□□□□□ -1.04
MCF2L-227ENST00000486806 CRISP1P54107 249 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms