RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 ATP1B1P05026 303 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 NUP62P37198 522 aaPredicted RBP12.14□□□□□ -0.47
HMGN1-216ENST00000486741 E2F1Q01094 437 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 GDPD3Q7L5L3 318 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 FAM46BQ96A09 425 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 DHRS1Q96LJ7 313 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 FBXO8Q9NRD0 319 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 IL20Q9NYY1 176 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 TMED7Q9Y3B3 224 aa12.14□□□□□ -0.47
HMGN1-216ENST00000486741 COL4A6Q14031 1691 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 NPIPA2E9PIF3 369 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 NPIPA3F8WFD2 350 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 OR2T1O43869 369 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 IGHV4-34P06331 123 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 GIFP27352 417 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 ART1P52961 327 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 GLO1Q04760 184 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 CD300CQ08708 224 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 TRIM61Q5EBN2 209 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 GLT8D1Q68CQ7 371 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 SFXN4Q6P4A7 337 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 SLC22A18ASQ8N1D0 253 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 SLC25A46Q96AG3 418 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 RBM24Q9BX46 236 aaKnown RBP12.13□□□□□ -0.47
HMGN1-216ENST00000486741 TRDV1A0A1B0GX56 115 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 MT-ND4P03905 459 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 OR2T7P0C7T2 308 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 IL9P15248 144 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 SRYQ05066 204 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 TATDN3Q17R31 274 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 AKIRIN2Q53H80 203 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 AGAP6Q5VW22 663 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 LANCL3Q6ZV70 420 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 OR2T27Q8NH04 317 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 OR14A16Q8NHC5 309 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 ZNF431Q8TF32 576 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-216ENST00000486741 FAM71F1Q96KD3 344 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-216ENST00000486741 AGAP4Q96P64 663 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 MTCH2Q9Y6C9 303 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 PTPRDP23468 1912 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 A0A0G2JMP0 313 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 A0A0X1KG70 313 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 A6NL46 340 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 DPM1O60762 260 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 FZD7O75084 574 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 CBX7O95931 251 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 NME1P15531 152 aaKnown RBP12.13□□□□□ -0.47
HMGN1-216ENST00000486741 DUSP3P51452 185 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-216ENST00000486741 PSPHP78330 225 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 CDK5Q00535 292 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 PLGLB1Q02325 96 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 ATXN7L3Q14CW9 347 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-216ENST00000486741 ELAVL1Q15717 326 aaKnown RBP12.13□□□□□ -0.47
HMGN1-216ENST00000486741 TMEM176BQ3YBM2 270 aaPredicted RBP12.13□□□□□ -0.47
HMGN1-216ENST00000486741 CBLN3Q6UW01 205 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 PRSS45Q7RTY3 260 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 ABI3BPQ7Z7G0 1075 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 CLDN22Q8N7P3 220 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 OR4M2Q8NGB6 313 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 OR5J2Q8NH18 312 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 OR52N1Q8NH53 320 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 GPR148Q8TDV2 347 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 AKAP1Q92667 903 aaKnown RBP eCLIP12.13□□□□□ -0.47
HMGN1-216ENST00000486741 TMEM106AQ96A25 262 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 C2orf42Q9NWW7 574 aa12.13□□□□□ -0.47
HMGN1-216ENST00000486741 MED12Q93074 2177 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 DOCK8Q8NF50 2099 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 OR7A10O76100 309 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 SDHBP21912 280 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 SPOCK1Q08629 439 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 FAM53BQ14153 422 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 OLFML2AQ68BL7 652 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 LYPD4Q6UWN0 246 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 BTN2A1Q7KYR7 527 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 IL22RA1Q8N6P7 574 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 CASTOR1Q8WTX7 329 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 FXYD6-FXYD2A0A087WZ82 144 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 H2AFB2P0C5Z0 115 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 LIMS3P0CW19 117 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 LIMS4P0CW20 117 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 CPEP16870 476 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 ENDOUP21128 410 aaKnown RBP12.12□□□□□ -0.47
HMGN1-216ENST00000486741 DCDP81605 110 aaKnown RBP12.12□□□□□ -0.47
HMGN1-216ENST00000486741 CAMK2DQ13557 499 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 KCNJ8Q15842 424 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 BAK1Q16611 211 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 PYHIN1Q6K0P9 492 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 DPY19L2P2Q6ZN68 376 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 VASH1Q7L8A9 365 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-216ENST00000486741 ASB12Q8WXK4 309 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 FXYD6Q9H0Q3 95 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 SLC25A19Q9HC21 320 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 KLHL9Q9P2J3 617 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 KCND3Q9UK17 655 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 CES1P1Q9UKY3 287 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 V9GY05 133 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 MYLKQ15746 1914 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 METTL21EPA6NDL7 271 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 FOLR1P15328 257 aa12.12□□□□□ -0.47
HMGN1-216ENST00000486741 HTR2AP28223 471 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms