RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 HEXAP06865 529 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 OR4E1P0C645 316 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 OR2T7P0C7T2 308 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 GKN3PP0CG01 181 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 F3P13726 295 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 GTF2F2P13984 249 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 PTAFRP25105 342 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 NDUFS1P28331 727 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 SSR2P43308 183 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 ACTA2P62736 377 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 ACTG2P63267 376 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 POU4F2Q12837 409 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 ATXN7L3Q14CW9 347 aaPredicted RBP9.76□□□□□ -0.85
CCDC171-208ENST00000486641 PLEKHN1Q494U1 663 aaPredicted RBP9.76□□□□□ -0.85
CCDC171-208ENST00000486641 UNQ6126/PRO20091Q6UXV3 157 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 STAC2Q6ZMT1 411 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 FRRS1Q6ZNA5 592 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 USP53Q70EK8 1073 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 SKA3Q8IX90 412 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 OR2A12Q8NGT7 310 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 OR2T27Q8NH04 317 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 OR8S1Q8NH09 359 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 PAQR8Q8TEZ7 354 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 C15orf40Q8WUR7 153 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 RGP1Q92546 391 aaPredicted RBP9.76□□□□□ -0.85
CCDC171-208ENST00000486641 PHYHIPQ92561 330 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 BPIFA2Q96DR5 249 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 LMLNQ96KR4 655 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 CNTNAP3BQ96NU0 1288 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 MACROD1Q9BQ69 325 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 C1orf198Q9H425 327 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 KLHL31Q9H511 634 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 CALML5Q9NZT1 146 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 DPP7Q9UHL4 492 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 ASF1AQ9Y294 204 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 A0A1W2PR48 441 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 PMS2P1A4D2B8 440 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 FGF16O43320 207 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 XRCC3O43542 346 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 GATCO43716 136 aaKnown RBP9.76□□□□□ -0.85
CCDC171-208ENST00000486641 FADS1O60427 444 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 CD3DP04234 171 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 CSF1P09603 554 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 ATXN8OSP0DMR3 200 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 ABOP16442 354 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 ADRA2CP18825 462 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 NANOS3P60323 173 aaKnown RBP9.76□□□□□ -0.85
CCDC171-208ENST00000486641 RAB5BP61020 215 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 FAM46CQ5VWP2 391 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 CST9Q5W186 159 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 CORO6Q6QEF8 472 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 SLC35F2Q8IXU6 374 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 RAD51AP1Q96B01 352 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 SEC22AQ96IW7 307 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 ARL5BQ96KC2 179 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 CASD1Q96PB1 797 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 PELI2Q9HAT8 420 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 SEBOXQ9HB31 216 aaPredicted RBP9.76□□□□□ -0.85
CCDC171-208ENST00000486641 TREM1Q9NP99 234 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 ADAM29Q9UKF5 820 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 ATG4BQ9Y4P1 393 aa9.76□□□□□ -0.85
CCDC171-208ENST00000486641 A0A0C4DFX4 3053 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 UBE2CO00762 179 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 LEFTY1O75610 366 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 LYPD3O95274 346 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 PMS2P2O95744 297 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 S100A6P06703 90 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 ASGR1P07306 291 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 ANXA2P07355 339 aaKnown RBP9.75□□□□□ -0.85
CCDC171-208ENST00000486641 AKAIN1P0CW23 69 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 SLC25A4P12235 298 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 SPI1P17947 270 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 S100PP25815 95 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 DLSTP36957 453 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 TRA2BP62995 288 aaKnown RBP9.75□□□□□ -0.85
CCDC171-208ENST00000486641 LTBQ06643 244 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 SREBF2Q12772 1141 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 SMCO1Q147U7 214 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 OR1Q1Q15612 314 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 ASTLQ6HA08 431 aaPredicted RBP9.75□□□□□ -0.85
CCDC171-208ENST00000486641 ACOT7LQ6ZUV0 252 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 NAA40Q86UY6 237 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 C12orf40Q86WS4 652 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 MISPQ8IVT2 679 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 RNF113BQ8IZP6 322 aaKnown RBP9.75□□□□□ -0.85
CCDC171-208ENST00000486641 OR2L13Q8N349 312 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 LILRB2Q8N423 598 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 SLC16A11Q8NCK7 471 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 OR52E2Q8NGJ4 325 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 OR4A4PQ8NGN8 299 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 OR1J4Q8NGS1 313 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 OR9A2Q8NGT5 310 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 ZNRF4Q8WWF5 429 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 ARSGQ96EG1 525 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 TNFRSF13CQ96RJ3 184 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 SEC11CQ9BY50 192 aa9.75□□□□□ -0.85
CCDC171-208ENST00000486641 ALX4Q9H161 411 aaPredicted RBP9.75□□□□□ -0.85
CCDC171-208ENST00000486641 TSPAN10Q9H1Z9 355 aaPredicted RBP9.75□□□□□ -0.85
CCDC171-208ENST00000486641 C6orf106Q9H6K1 298 aaPredicted RBP9.75□□□□□ -0.85
CCDC171-208ENST00000486641 TAS2R8Q9NYW2 309 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms