RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 HIF1ANQ9NWT6 349 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 CLEC5AQ9NY25 188 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 PAK5Q9P286 719 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 MYOTQ9UBF9 498 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 ZFP69BQ9UJL9 534 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 RPH3ALQ9UNE2 315 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 ABCG2Q9UNQ0 655 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 TFR2Q9UP52 801 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 MGAT4BQ9UQ53 548 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 MRPS33Q9Y291 106 aaKnown RBP6.13□□□□□ -1.43
HDAC3-209ENST00000486618 DHRS7Q9Y394 339 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 NBEAL1Q6ZS30 2694 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 DSCAMO60469 2012 aa6.13□□□□□ -1.43
HDAC3-209ENST00000486618 CHD3Q12873 2000 aaKnown RBP6.13□□□□□ -1.43
HDAC3-209ENST00000486618 A0A0G2JMM0 328 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 A0A1W2PPB8 328 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 A0A1W2PRB8 838 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 A0A1W2PRS3 328 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 MEX3AA1L020 520 aaKnown RBP6.12□□□□□ -1.43
HDAC3-209ENST00000486618 FAM90A18PA6NE21 464 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 FAM90A16PA6NEW6 464 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 FAM90A9PA6NNJ1 464 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 KIR3DP1A8MWS1 328 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 FAM90A5PA8MXJ8 464 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 INAFM1C9JVW0 142 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 LRRN3E7EW58 273 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 G3V3Y1 287 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 WWP2O00308 870 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 CASKO14936 926 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 LDLRAD4O15165 306 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 RNF13O43567 381 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 SPRY1O43609 319 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-209ENST00000486618 TRIM13O60858 407 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 EPPINO95925 133 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 C8GP07360 202 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 DBHP09172 617 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 FAM90A15PP0C7V4 464 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 FAM90A14PP0C7W9 464 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 COX5BP10606 129 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 COX7A2P14406 83 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 ACHEP22303 614 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 EEF1B2P24534 225 aaKnown RBP6.12□□□□□ -1.43
HDAC3-209ENST00000486618 G0S2P27469 103 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 SERPINB1P30740 379 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 CEACAM8P31997 349 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-209ENST00000486618 DCTDP32321 178 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 TIMP3P35625 211 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 AHRP35869 848 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 DNASE1L1P49184 302 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 RGS4P49798 205 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 GPR143P51810 404 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 RAB8AP61006 207 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 UFM1P61960 85 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 BST1Q10588 318 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 TSPAN31Q12999 210 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 RAB32Q13637 225 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 FLOT2Q14254 428 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 CSHL1Q14406 222 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 SIX1Q15475 284 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-209ENST00000486618 ELAVL1Q15717 326 aaKnown RBP6.12□□□□□ -1.43
HDAC3-209ENST00000486618 MAPK11Q15759 364 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 XKR6Q5GH73 641 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.12□□□□□ -1.43
HDAC3-209ENST00000486618 CCNJQ5T5M9 372 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 C1orf146Q5VVC0 180 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 KIAA0930Q6ICG6 404 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-209ENST00000486618 UGT3A1Q6NUS8 523 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 IDO2Q6ZQW0 420 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 CENPUQ71F23 418 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 ZNF551Q7Z340 670 aaPredicted RBP6.12□□□□□ -1.43
HDAC3-209ENST00000486618 HIPK1Q86Z02 1210 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 LACC1Q8IV20 430 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 GID4Q8IVV7 300 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 TMEM185AQ8NFB2 350 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 OR4K1Q8NGD4 311 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 OR56B1Q8NGI3 324 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 OR5L2Q8NGL0 311 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 LINC01560Q8TB33 94 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 DAZLQ92904 295 aaKnown RBP6.12□□□□□ -1.43
HDAC3-209ENST00000486618 MYDGFQ969H8 173 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 ELP4Q96EB1 424 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 FAR2Q96K12 515 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 CLPTM1LQ96KA5 538 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 DOCK7Q96N67 2140 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 BTBD9Q96Q07 612 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 PANX1Q96RD7 426 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 RASL10BQ96S79 203 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 PSD2Q9BQI7 771 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 INPP5KQ9BT40 448 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 ADI1Q9BV57 179 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 PRRG3Q9BZD7 231 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 MEAF6Q9HAF1 191 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 BCO1Q9HAY6 547 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 FOLH1BQ9HBA9 442 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 ACKR4Q9NPB9 350 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 ADAP2Q9NPF8 381 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 PRTFDC1Q9NRG1 225 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 INIPQ9NRY2 104 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 MED17Q9NVC6 651 aa6.12□□□□□ -1.43
HDAC3-209ENST00000486618 CMTM6Q9NX76 183 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms