RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 ZNF620Q6ZNG0 422 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 USP51Q70EK9 711 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 TMEM86BQ8N661 226 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 OR9K2Q8NGE7 335 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 ST7LQ8TDW4 575 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 CDS1Q92903 461 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 RAB1CQ92928 201 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 UPRTQ96BW1 309 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 TIMD4Q96H15 378 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 MS4A14Q96JA4 679 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 ZNF75AQ96N20 296 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 FANCD2OSQ96PS1 177 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 LAT2Q9GZY6 243 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 HOXD1Q9GZZ0 328 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 VPS11Q9H270 941 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 SIRT5Q9NXA8 310 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 GAR1Q9NY12 217 aaKnown RBP6.94□□□□□ -1.3
XRN1-212ENST00000486211 NKIRAS2Q9NYR9 191 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 GRHL1Q9NZI5 618 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 TMEM181Q9P2C4 612 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 ZNF346Q9UL40 294 aaKnown RBP6.94□□□□□ -1.3
XRN1-212ENST00000486211 NFU1Q9UMS0 254 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.94□□□□□ -1.3
XRN1-212ENST00000486211 DTNAQ9Y4J8 743 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 DSPPQ9NZW4 1301 aa6.94□□□□□ -1.3
XRN1-212ENST00000486211 HYDINQ4G0P3 5121 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 TRAV40A0A0B4J280 105 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 A0A1W2PPW3 197 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 FAM159BA6NKW6 160 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 A8MXK9 166 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 C3orf84H3BNL1 204 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 STX16-NPEPL1H3BU86 382 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 STX16O14662 325 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 EIF1BO60739 113 aaKnown RBP6.93□□□□□ -1.3
XRN1-212ENST00000486211 KRT33AO76009 404 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 MELTFP08582 738 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 RPS17P08708 135 aaKnown RBP6.93□□□□□ -1.3
XRN1-212ENST00000486211 MYZAPP0CAP1 466 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 MAPK1P28482 360 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 APOBEC1P41238 236 aaKnown RBP6.93□□□□□ -1.3
XRN1-212ENST00000486211 FNTAP49354 379 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 CLK1P49759 484 aaKnown RBP6.93□□□□□ -1.3
XRN1-212ENST00000486211 SH3BGRP55822 239 aaPredicted RBP6.93□□□□□ -1.3
XRN1-212ENST00000486211 ARL4CP56559 192 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 SEC61A1P61619 476 aaKnown RBP6.93□□□□□ -1.3
XRN1-212ENST00000486211 ARF1P84077 181 aaKnown RBP6.93□□□□□ -1.3
XRN1-212ENST00000486211 TEKQ02763 1124 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 PAX2Q02962 417 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 PDIA2Q13087 525 aaKnown RBP6.93□□□□□ -1.3
XRN1-212ENST00000486211 PPP1R7Q15435 360 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 PCGF3Q3KNV8 242 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 FOXB2Q5VYV0 432 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 ZCCHC12Q6PEW1 402 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 Q6ZSV7 163 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 ZBED8Q8IZ13 594 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 GRK7Q8WTQ7 553 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 TMEM234Q8WY98 164 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 DYRK2Q92630 601 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 PHF21BQ96EK2 531 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 TSPAN32Q96QS1 320 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 STACQ99469 402 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 BAG1Q99933 345 aaPredicted RBP6.93□□□□□ -1.3
XRN1-212ENST00000486211 NOX4Q9NPH5 578 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 HINT3Q9NQE9 182 aaKnown RBP6.93□□□□□ -1.3
XRN1-212ENST00000486211 MIEF1Q9NQG6 463 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 DUSP22Q9NRW4 184 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 SIRT3Q9NTG7 399 aaPredicted RBP6.93□□□□□ -1.3
XRN1-212ENST00000486211 B3GNT2Q9NY97 397 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 UBAP1Q9NZ09 502 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 TXNDC16Q9P2K2 825 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 DUSP13Q9UII6 198 aa6.93□□□□□ -1.3
XRN1-212ENST00000486211 SPIN1Q9Y657 262 aaPredicted RBP6.93□□□□□ -1.3
XRN1-212ENST00000486211 CENPVL1A0A0U1RR11 272 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 AGAP5A6NIR3 686 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 RPL36A-HNRNPH2H7BZ11 118 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 GPR137BO60478 399 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 OR4F21O95013 312 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 CLPTM1O96005 669 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 OTCP00480 354 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 ZNF14P17017 642 aaPredicted RBP6.92□□□□□ -1.3
XRN1-212ENST00000486211 TSPAN8P19075 237 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 ATP6V1C1P21283 382 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 FUT4P22083 530 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 SSTR1P30872 391 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 SPRP35270 261 aaPredicted RBP6.92□□□□□ -1.3
XRN1-212ENST00000486211 SLC6A9P48067 706 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 HTR6P50406 440 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 CDH13P55290 713 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 RPS23P62266 143 aaKnown RBP6.92□□□□□ -1.3
XRN1-212ENST00000486211 SLC35A1P78382 337 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 ROR2Q01974 943 aaKnown RBP6.92□□□□□ -1.3
XRN1-212ENST00000486211 DBPQ10586 325 aaPredicted RBP6.92□□□□□ -1.3
XRN1-212ENST00000486211 HNRNPA0Q13151 305 aaKnown RBP6.92□□□□□ -1.3
XRN1-212ENST00000486211 FAM83EQ2M2I3 478 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 HFEQ30201 348 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 GLIPR1L2Q4G1C9 344 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 PDZK1Q5T2W1 519 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 BRD3OSQ6XYD6 125 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 SZRD1Q7Z422 152 aa6.92□□□□□ -1.3
XRN1-212ENST00000486211 TMEM99Q8N816 258 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms