RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ALKBH3Q96Q83 286 aaPredicted RBP15.5■□□□□ 0.07
COL6A1-204ENST00000486023 EPYCQ99645 322 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 ARHGDIGQ99819 225 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 SH3GL1Q99961 368 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 USP22Q9UPT9 525 aa15.5■□□□□ 0.07
COL6A1-204ENST00000486023 MAGED1Q9Y5V3 778 aaPredicted RBP15.5■□□□□ 0.07
COL6A1-204ENST00000486023 FLNAP21333 2647 aaKnown RBP15.49■□□□□ 0.07
COL6A1-204ENST00000486023 A0A087WUJ7 227 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 A0A096LPE4 126 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 A0A0B4J2E0 115 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 A0A1B0GX12 115 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 A0A1W2PPZ6 126 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 TRIM64A6NGJ6 449 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 TRIM64BA6NI03 449 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 ZNF587BE7ETH6 402 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 PDLIM1O00151 329 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 CD40P25942 277 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 PCGF2P35227 344 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 MDH1P40925 334 aaKnown RBP15.49■□□□□ 0.07
COL6A1-204ENST00000486023 PMS2P3Q13401 168 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 ENTPD8Q5MY95 495 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 CARD17Q5XLA6 110 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 HMBOX1Q6NT76 420 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 ABHD12BQ7Z5M8 362 aaPredicted RBP15.49■□□□□ 0.07
COL6A1-204ENST00000486023 NET1Q7Z628 596 aaPredicted RBP15.49■□□□□ 0.07
COL6A1-204ENST00000486023 SLC30A8Q8IWU4 369 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 DEPDC4Q8N2C3 294 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 POU5F2Q8N7G0 328 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 PCYOX1LQ8NBM8 494 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 OR4D11Q8NGI4 311 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 TAMM41Q96BW9 452 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 C18orf12Q96KH6 178 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 ASPNQ9BXN1 380 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 MED4Q9NPJ6 270 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 SLC17A5Q9NRA2 495 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 KLHL14Q9P2G3 628 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 CAPN7Q9Y6W3 813 aa15.49■□□□□ 0.07
COL6A1-204ENST00000486023 SHISA9B4DS77 424 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 H7C1Q1 480 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 KPNA4O00629 521 aaPredicted RBP15.48■□□□□ 0.07
COL6A1-204ENST00000486023 AHCYP23526 432 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 PTAFRP25105 342 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 PRPS1P60891 318 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 SLC25A3Q00325 362 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 LTBQ06643 244 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 NPTX1Q15818 432 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 C5orf46Q6UWT4 87 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 SSX8Q7RTT4 187 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 UEVLDQ8IX04 471 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 CIARTQ8N365 385 aaPredicted RBP15.48■□□□□ 0.07
COL6A1-204ENST00000486023 GSX2Q9BZM3 304 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 ALG2Q9H553 416 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 DLL4Q9NR61 685 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 GID8Q9NWU2 228 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 B3GALT5Q9Y2C3 310 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 AMDHD2Q9Y303 409 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 SH3GLB1Q9Y371 365 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 ATP23Q9Y6H3 246 aa15.48■□□□□ 0.07
COL6A1-204ENST00000486023 ZNF469Q96JG9 3925 aaPredicted RBP15.48■□□□□ 0.07
COL6A1-204ENST00000486023 SHOX2O60902 331 aaPredicted RBP15.47■□□□□ 0.07
COL6A1-204ENST00000486023 SLC43A1O75387 559 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 INHBBP09529 407 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 DANCRP0C864 163 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 FOSL1P15407 271 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 TNFRSF1BP20333 461 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 CD247P20963 164 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 GZMMP51124 257 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 RIPPLY3P57055 190 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 UBE2NP61088 152 aaKnown RBP15.47■□□□□ 0.07
COL6A1-204ENST00000486023 TUBA1BP68363 451 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 TUBA4AP68366 448 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 ROR2Q01974 943 aaKnown RBP15.47■□□□□ 0.07
COL6A1-204ENST00000486023 NRF1Q16656 503 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 TUBA1AQ71U36 451 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 LINGO2Q7L985 606 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 GPR137CQ8N3F9 429 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 C10orf82Q8WW14 230 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 TRMT61AQ96FX7 289 aaKnown RBP15.47■□□□□ 0.07
COL6A1-204ENST00000486023 MOGAT1Q96PD6 335 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 EMC6Q9BV81 110 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 MRGBPQ9NV56 204 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 SLC7A7Q9UM01 511 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 MGAT4BQ9UQ53 548 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 NF1P21359 2839 aa15.47■□□□□ 0.07
COL6A1-204ENST00000486023 BBIP1A8MTZ0 92 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 E7EQL1 145 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 MS4A18H0YCH9 400 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 M0R3G1 203 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 FXYD1O00168 92 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 OR6A2O95222 327 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 WNT11O96014 354 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 HPRP00739 348 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 BGLAPP02818 100 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 C8BP07358 591 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 HLA-DOBP13765 273 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 PGGHGQ32M88 737 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 MS4A18Q3C1V0 323 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 ZNF613Q6PF04 617 aa15.46■□□□□ 0.07
COL6A1-204ENST00000486023 TTC33Q6PID6 262 aaPredicted RBP15.46■□□□□ 0.07
COL6A1-204ENST00000486023 C1orf162Q8NEQ5 155 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms