RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ZNF786Q8N393 782 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 ANKS4BQ8N8V4 417 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 WDR60Q8WVS4 1066 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 SLC35A5Q9BS91 424 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 SOX7Q9BT81 388 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 ZIM2Q9NZV7 527 aa11.3□□□□□ -0.6
HDAC6-227ENST00000485102 A0A096LPI6 279 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 A0A0A6YYJ9 748 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 CDHR4A6H8M9 788 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 A8MVM7 634 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 CCDC22O60826 627 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 NPIPB7O75200 414 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 IL6P05231 212 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 CECR9P0C854 216 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 CBR1P16152 277 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 CDH2P19022 906 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-227ENST00000485102 CXCR1P25024 350 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 EPHA3P29320 983 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 CHI3L1P36222 383 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-227ENST00000485102 ACAA2P42765 397 aaKnown RBP11.29□□□□□ -0.6
HDAC6-227ENST00000485102 CHN2P52757 468 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 UBE2NP61088 152 aaKnown RBP11.29□□□□□ -0.6
HDAC6-227ENST00000485102 GNGT1P63211 74 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 HGFACQ04756 655 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 RIN1Q13671 783 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 OR7A5Q15622 319 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 PDCD4Q53EL6 469 aaKnown RBP11.29□□□□□ -0.6
HDAC6-227ENST00000485102 SPANXN4Q5MJ08 99 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 DEF8Q6ZN54 512 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 RNF130Q86XS8 419 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 MIER2Q8N344 545 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 TRIML2Q8N7C3 387 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 ANKFN1Q8N957 763 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 LINC01356Q8N9X3 169 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 IL17RDQ8NFM7 739 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 ZFAND2BQ8WV99 257 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 C3orf49Q96BT1 292 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 ANKRD27Q96NW4 1050 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 NELFAQ9H3P2 528 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 NPHS2Q9NP85 383 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 FGFR1OP2Q9NVK5 253 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 TMEFF2Q9UIK5 374 aaPredicted RBP11.29□□□□□ -0.6
HDAC6-227ENST00000485102 RASD1Q9Y272 281 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 PCDHB14Q9Y5E9 798 aa11.29□□□□□ -0.6
HDAC6-227ENST00000485102 DYSFO75923 2080 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 A0A0G2JND7 137 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 TMEM129A0AVI4 362 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 TMEM229AB2RXF0 380 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 E9PBE3 544 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 SLC22A2O15244 555 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 FZD7O75084 574 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 KRT33AO76009 404 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 LGI1O95970 557 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 ERCC1P07992 297 aaPredicted RBP11.28□□□□□ -0.6
HDAC6-227ENST00000485102 TFPTP0C1Z6 253 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 DAOP14920 347 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 PCMT1P22061 227 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 S100A3P33764 101 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 SELENOPP49908 381 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 IDH3AP50213 366 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 MAPRE2Q15555 327 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 CARTPTQ16568 116 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 WBP2NLQ6ICG8 309 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 MSANTD1Q6ZTZ1 278 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 LINGO2Q7L985 606 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 HMGN2P46Q86SG4 172 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 GPAT4Q86UL3 456 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 EPHX4Q8IUS5 362 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 CCDC36Q8IYA8 594 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 PEX5LQ8IYB4 626 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 STK35Q8TDR2 534 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 TAPBPLQ9BX59 468 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 AIG1Q9NVV5 245 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 RCE1Q9Y256 329 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 DSPPQ9NZW4 1301 aa11.28□□□□□ -0.6
HDAC6-227ENST00000485102 LRP5LA4QPB2 252 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 CCDC154A6NI56 674 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 FTCDNL1E5RQL4 147 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 FRS3O43559 492 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 UPK3AO75631 287 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 SLC22A3O75751 556 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 ZNF432O94892 652 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 C1QCP02747 245 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 IGFBP1P08833 259 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-227ENST00000485102 NR2F1P10589 423 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 NPR2P20594 1047 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 CALCRP30988 508 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 ARR3P36575 388 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 EVX1P49640 407 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 DVL1P1P54792 670 aaPredicted RBP11.27□□□□□ -0.61
HDAC6-227ENST00000485102 CDH15P55291 814 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 MAPK11Q15759 364 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 FAM174BQ3ZCQ3 159 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 RNF220Q5VTB9 566 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 C1orf140Q5VVS0 124 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 SPATA21Q7Z572 469 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 MFSD8Q8NHS3 518 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 TSPEARQ8WU66 669 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 SLC35B4Q969S0 331 aa11.27□□□□□ -0.61
HDAC6-227ENST00000485102 PPP1R36Q96LQ0 422 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms