RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 OR4F15Q8NGB8 312 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 OR6S1Q8NH40 331 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 VPS33AQ96AX1 596 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 NELFAQ9H3P2 528 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 TMBIM4Q9HC24 238 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 FKBP7Q9Y680 259 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 JMJD1CQ15652 2540 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 B9A039 149 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 OR2T1O43869 369 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 UPK3AO75631 287 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 IGHV4-31P0DP07 118 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 THBS2P35442 1172 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 GZMKP49863 264 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 MAGOHP61326 146 aaKnown RBP9.98□□□□□ -0.81
SCFD1-206ENST00000484733 LSRQ86X29 649 aaPredicted RBP9.98□□□□□ -0.81
SCFD1-206ENST00000484733 GOLGA6L1Q8N7Z2 621 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 ADPRHL1Q8NDY3 354 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 NUP37Q8NFH4 326 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 OR9I1Q8NGQ6 314 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 SLC38A4Q969I6 547 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 KCNS3Q9BQ31 491 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 EVA1AQ9H8M9 152 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 USH1CQ9Y6N9 552 aa9.98□□□□□ -0.81
SCFD1-206ENST00000484733 PLCE1Q9P212 2302 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 AIM2O14862 343 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 SLC43A1O75387 559 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 TGDSO95455 350 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 CRYAAP02489 173 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 NUDT7P0C024 238 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 ARAFP10398 606 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 CBR1P16152 277 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 CDH2P19022 906 aaPredicted RBP9.97□□□□□ -0.81
SCFD1-206ENST00000484733 SERPINF1P36955 418 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 SNRPD2P62316 118 aaKnown RBP9.97□□□□□ -0.81
SCFD1-206ENST00000484733 NAAAQ02083 359 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 LGALS3BPQ08380 585 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 C6orf10Q5SRN2 563 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 CCDC36Q8IYA8 594 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 HTRA1Q92743 480 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 FBXO17Q96EF6 278 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 KTI12Q96EK9 354 aaPredicted RBP9.97□□□□□ -0.81
SCFD1-206ENST00000484733 KCNK17Q96T54 332 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 PLK3Q9H4B4 646 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 CA10Q9NS85 328 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 B3GAT1Q9P2W7 334 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 RPS6KB2Q9UBS0 482 aa9.97□□□□□ -0.81
SCFD1-206ENST00000484733 RNF212BA8MTL3 300 aa9.96□□□□□ -0.81
SCFD1-206ENST00000484733 IGKV3-15P01624 115 aa9.96□□□□□ -0.81
SCFD1-206ENST00000484733 ZNF43P17038 809 aa9.96□□□□□ -0.81
SCFD1-206ENST00000484733 PPIBP23284 216 aaKnown RBP9.96□□□□□ -0.81
SCFD1-206ENST00000484733 RPS5P46782 204 aaKnown RBP9.96□□□□□ -0.81
SCFD1-206ENST00000484733 PPOXP50336 477 aa9.96□□□□□ -0.81
SCFD1-206ENST00000484733 CLDN17P56750 224 aa9.96□□□□□ -0.81
SCFD1-206ENST00000484733 ROR2Q01974 943 aaKnown RBP9.96□□□□□ -0.81
SCFD1-206ENST00000484733 FAM69AQ5T7M9 428 aa9.96□□□□□ -0.81
SCFD1-206ENST00000484733 SLC2A7Q6PXP3 512 aa9.96□□□□□ -0.81
SCFD1-206ENST00000484733 DNAJA4Q8WW22 397 aaPredicted RBP9.96□□□□□ -0.81
SCFD1-206ENST00000484733 TMEM158Q8WZ71 300 aa9.96□□□□□ -0.81
SCFD1-206ENST00000484733 C7orf26Q96N11 449 aa9.96□□□□□ -0.81
SCFD1-206ENST00000484733 SORCS2Q96PQ0 1159 aa9.96□□□□□ -0.81
SCFD1-206ENST00000484733 PIMREGQ9BSJ6 248 aa9.96□□□□□ -0.81
SCFD1-206ENST00000484733 RSPO3Q9BXY4 272 aaPredicted RBP9.96□□□□□ -0.81
SCFD1-206ENST00000484733 ARFGEF3Q5TH69 2177 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 TRAV36DV7A0A075B6V5 113 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 C5orf58C9J3I9 102 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 AKAP8O43823 692 aaKnown RBP9.96□□□□□ -0.82
SCFD1-206ENST00000484733 CECR9P0C854 216 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 GTF2E2P29084 291 aaKnown RBP9.96□□□□□ -0.82
SCFD1-206ENST00000484733 NR4A2P43354 598 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 MFSD13AQ14CX5 517 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 ADIPOQQ15848 244 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 FAM91A1Q658Y4 838 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 BLOC1S3Q6QNY0 202 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 H1FNTQ75WM6 255 aaPredicted RBP9.96□□□□□ -0.82
SCFD1-206ENST00000484733 MSRB3Q8IXL7 192 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 TAAR8Q969N4 342 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 SLC25A36Q96CQ1 311 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 ALKBH3Q96Q83 286 aaPredicted RBP9.96□□□□□ -0.82
SCFD1-206ENST00000484733 CCDC28BQ9BUN5 200 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 SPATA5L1Q9BVQ7 753 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 ZNF442Q9H7R0 627 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 GPR35Q9HC97 309 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 SLC52A3Q9NQ40 469 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 SLC25A37Q9NYZ2 338 aa9.96□□□□□ -0.82
SCFD1-206ENST00000484733 A0A1B0GWA3 101 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 LOC390937A0A1W2PQ73 354 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 VSTM5A8MXK1 200 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 CALCRP30988 508 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 STX1BP61266 288 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 ARF1P84077 181 aaKnown RBP9.95□□□□□ -0.82
SCFD1-206ENST00000484733 GCNT6Q5T4J0 391 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 REEP3Q6NUK4 255 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 FUNDC1Q8IVP5 155 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 BHLHE22Q8NFJ8 381 aaPredicted RBP9.95□□□□□ -0.82
SCFD1-206ENST00000484733 IL17RDQ8NFM7 739 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 MAL2Q969L2 176 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 ZBTB9Q96C00 473 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 SLC41A3Q96GZ6 507 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 LRR1Q96L50 414 aa9.95□□□□□ -0.82
SCFD1-206ENST00000484733 KLHL14Q9P2G3 628 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms