RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 EXOSC3Q9NQT5 275 aaKnown RBP3.71□□□□□ -1.82
PTCD3-214ENST00000483925 SDHAF3Q9NRP4 125 aa3.71□□□□□ -1.82
PTCD3-214ENST00000483925 THUMPD1Q9NXG2 353 aaKnown RBP3.71□□□□□ -1.82
PTCD3-214ENST00000483925 EURLQ9NYK6 297 aa3.71□□□□□ -1.82
PTCD3-214ENST00000483925 RBAKQ9NYW8 714 aaPredicted RBP3.71□□□□□ -1.82
PTCD3-214ENST00000483925 IGHV4-4A0A075B6R2 117 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 TRBV5-4A0A0C4DH59 114 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 C15orf61A6NNL5 157 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 B4DXG7 233 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 RNASEK-C17orf49H0YIS7 233 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 GOLGA8RI6L899 631 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 XRCC2O43543 280 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 SLC19A2O60779 497 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 NDUFS6O75380 124 aaKnown RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 FRAT2O75474 233 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 FADS2O95864 444 aaKnown RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 CRYABP02511 175 aaKnown RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 RPN2P04844 631 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 GLAP06280 429 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 H2AFZP0C0S5 128 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 PAX1P15863 534 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 BCL3P20749 454 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 PSMB6P28072 239 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 CD40LGP29965 261 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 UGT1A3P35503 534 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 DDOSTP39656 456 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 LEPP41159 167 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 ATP4BP51164 291 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 EFNA3P52797 238 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 FBXW4P57775 412 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 NANOS2P60321 138 aaKnown RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 VLDLRP98155 873 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 SIGLEC14Q08ET2 396 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 KIAA0141Q14154 515 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 PAGE2BQ5JRK9 111 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 SOHLH1Q5JUK2 328 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 MUC21Q5SSG8 566 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 FAM120AOSQ5T036 256 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 C3P1Q6ZMU1 363 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 ZNF836Q6ZNA1 936 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 SH2D5Q6ZV89 423 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 PGAP1Q75T13 922 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 NUFIP2Q7Z417 695 aaKnown RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 CMC1Q7Z7K0 106 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 TRPT1Q86TN4 253 aaKnown RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 ZBED8Q8IZ13 594 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 CMTM1Q8IZ96 169 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 KRT222Q8N1A0 295 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 CSNK1A1LQ8N752 337 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 STPG4Q8N801 248 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 SNX31Q8N9S9 440 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 TMEM178AQ8NBL3 297 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 OR9A4Q8NGU2 314 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 RFESDQ8TAC1 157 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 NUBPLQ8TB37 319 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 ZPLD1Q8TCW7 415 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 TMEM239Q8WW34 195 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 CAPSLQ8WWF8 208 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 GTF2H4Q92759 462 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 APH1AQ96BI3 265 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 CELF6Q96J87 481 aaKnown RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 RNF170Q96K19 258 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 SH3GL1Q99961 368 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 ANGPTL4Q9BY76 406 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 DEFB129Q9H1M3 183 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 PSTPIP2Q9H939 334 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 UCK1Q9HA47 277 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 CD209Q9NNX6 404 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 FGF20Q9NP95 211 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 PRSS16Q9NQE7 514 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 DEPPQ9NTK1 212 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 NUDT4Q9NZJ9 180 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 ZNF282Q9UDV7 671 aaPredicted RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 WARS2Q9UGM6 360 aaKnown RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 SAMD4AQ9UPU9 718 aaKnown RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 NTNG1Q9Y2I2 539 aa3.7□□□□□ -1.82
PTCD3-214ENST00000483925 RPL36Q9Y3U8 105 aaKnown RBP3.7□□□□□ -1.82
PTCD3-214ENST00000483925 LRPPRCP42704 1394 aaKnown RBP3.69□□□□□ -1.82
PTCD3-214ENST00000483925 MEX3AA1L020 520 aaKnown RBP3.69□□□□□ -1.82
PTCD3-214ENST00000483925 MGAT4DA6NG13 374 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 SAGE2PA6NJ88 616 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 SULT2B1O00204 365 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 TOR1AO14656 332 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 PPP1R2P9O14990 202 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 SCAMP2O15127 329 aaKnown RBP3.69□□□□□ -1.82
PTCD3-214ENST00000483925 PCDH7O60245 1069 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 UGT1A9O60656 530 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 ENTPD5O75356 428 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 MYO1DO94832 1006 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 AHSA1O95433 338 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 ATP1A1P05023 1023 aaKnown RBP3.69□□□□□ -1.82
PTCD3-214ENST00000483925 KRT16P08779 473 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 WNT2P09544 360 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 OCMP0CE72 109 aaPredicted RBP3.69□□□□□ -1.82
PTCD3-214ENST00000483925 CALCRP30988 508 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 P2RY2P41231 377 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 TFPI2P48307 235 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 MFAP2P55001 183 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 GPX6P59796 221 aa3.69□□□□□ -1.82
PTCD3-214ENST00000483925 MYL6P60660 151 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms