RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 ROR2Q01974 943 aaKnown RBP15.67■□□□□ 0.1
ATG4B-221ENST00000483778 CHRNB3Q05901 458 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 PAGE3Q5JUK9 113 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 PHYHD1Q5SRE7 291 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 ARIH2OSQ8N7S6 290 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 ANKS4BQ8N8V4 417 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 NFKBIDQ8NI38 313 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 SLC38A2Q96QD8 506 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 EBF4Q9BQW3 602 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 IKZF5Q9H5V7 419 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 SLCO1B3Q9NPD5 702 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 IFT52Q9Y366 437 aa15.67■□□□□ 0.1
ATG4B-221ENST00000483778 A0A096LPI6 279 aa15.66■□□□□ 0.1
ATG4B-221ENST00000483778 VAMP5O95183 116 aa15.66■□□□□ 0.1
ATG4B-221ENST00000483778 AHSA1O95433 338 aa15.66■□□□□ 0.1
ATG4B-221ENST00000483778 CECR9P0C854 216 aa15.66■□□□□ 0.1
ATG4B-221ENST00000483778 IDH3AP50213 366 aa15.66■□□□□ 0.1
ATG4B-221ENST00000483778 HGFACQ04756 655 aa15.66■□□□□ 0.1
ATG4B-221ENST00000483778 ADIPOQQ15848 244 aa15.66■□□□□ 0.1
ATG4B-221ENST00000483778 BEND6Q5SZJ8 279 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-221ENST00000483778 KLHL24Q6TFL4 600 aa15.66■□□□□ 0.1
ATG4B-221ENST00000483778 FOXN4Q96NZ1 517 aa15.66■□□□□ 0.1
ATG4B-221ENST00000483778 CRNNQ9UBG3 495 aaPredicted RBP15.66■□□□□ 0.1
ATG4B-221ENST00000483778 PRDM4Q9UKN5 801 aa15.66■□□□□ 0.1
ATG4B-221ENST00000483778 PMF1-BGLAPU3KQ54 211 aa15.66■□□□□ 0.1
ATG4B-221ENST00000483778 A0A1B0GWA3 101 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 VWC2LB2RUY7 222 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 MS4A18H0YCH9 400 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 M0R082 166 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 TPST2O60704 377 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 HPRP00739 348 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 IGLV1-44P01699 117 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 SLC25A16P16260 332 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 NAAAQ02083 359 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 ZSWIM7Q19AV6 140 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 MS4A18Q3C1V0 323 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 CHRFAM7AQ494W8 412 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 BLOC1S3Q6QNY0 202 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 VHLLQ6RSH7 139 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 NHLRC1Q6VVB1 395 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 PHC2Q8IXK0 858 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 ZCCHC24Q8N2G6 241 aaKnown RBP15.65■□□□□ 0.1
ATG4B-221ENST00000483778 ZNF417Q8TAU3 575 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 OXGR1Q96P68 337 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 ZNF587Q96SQ5 575 aaPredicted RBP15.65■□□□□ 0.1
ATG4B-221ENST00000483778 KCNK17Q96T54 332 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 LINC00470Q9BZP3 86 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 GPR35Q9HC97 309 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 CA10Q9NS85 328 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 THUMPD1Q9NXG2 353 aaKnown RBP15.65■□□□□ 0.1
ATG4B-221ENST00000483778 VAPAQ9P0L0 249 aa15.65■□□□□ 0.1
ATG4B-221ENST00000483778 ARPC4-TTLL3A0A0A6YYG9 625 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 SLC35F4A4IF30 521 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 RNF212BA8MTL3 300 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 FZD7O75084 574 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 SEC14L2O76054 403 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 ARAFP10398 606 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 HLA-DOBP13765 273 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 USF1P22415 310 aaPredicted RBP15.64■□□□□ 0.09
ATG4B-221ENST00000483778 GRPRP30550 384 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 SERPINF1P36955 418 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 UBE2NP61088 152 aaKnown RBP15.64■□□□□ 0.09
ATG4B-221ENST00000483778 ADRM1Q16186 407 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 LRIF1Q5T3J3 769 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 C6orf89Q6UWU4 347 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 ABHD12BQ7Z5M8 362 aaPredicted RBP15.64■□□□□ 0.09
ATG4B-221ENST00000483778 BBS10Q8TAM1 723 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 MAGEE2Q8TD90 523 aaPredicted RBP15.64■□□□□ 0.09
ATG4B-221ENST00000483778 PROX1Q92786 737 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 VRK1Q99986 396 aaPredicted RBP15.64■□□□□ 0.09
ATG4B-221ENST00000483778 OBP2BQ9NPH6 170 aa15.64■□□□□ 0.09
ATG4B-221ENST00000483778 TRBV5-3A0A0A0MS03 114 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 TMEM129A0AVI4 362 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 TMEM247A6NEH6 219 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 RPL36A-HNRNPH2H7BZ11 118 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 IGFBP1P08833 259 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-221ENST00000483778 OR4A8P0C604 315 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 ETS2P15036 469 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 ZNF16P17020 682 aaPredicted RBP15.63■□□□□ 0.09
ATG4B-221ENST00000483778 ZNF43P17038 809 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 MRPL19P49406 292 aaKnown RBP15.63■□□□□ 0.09
ATG4B-221ENST00000483778 LSM11P83369 360 aaKnown RBP eCLIP15.63■□□□□ 0.09
ATG4B-221ENST00000483778 FADDQ13158 208 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 CEACAM16Q2WEN9 425 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 C1QTNF12Q5T7M4 302 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 CYB5R2Q6BCY4 276 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 PODNL1Q6PEZ8 512 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 TMEM123Q8N131 208 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 GOLGA6L1Q8N7Z2 621 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 LSMEM1Q8N8F7 131 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 TXNDC15Q96J42 360 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 OR2M2Q96R28 347 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 EMC6Q9BV81 110 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 KATNB1Q9BVA0 655 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 ARMC7Q9H6L4 198 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 TCF7L2Q9NQB0 619 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 CCDC167Q9P0B6 97 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 RPS6KB2Q9UBS0 482 aa15.63■□□□□ 0.09
ATG4B-221ENST00000483778 IGHV4-61A0A0C4DH41 118 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 C5orf58C9J3I9 102 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms