RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 HIST2H3AQ71DI3 136 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 CXXC5Q7LFL8 322 aaKnown RBP7.2□□□□□ -1.26
COL4A5-205ENST00000483338 SLC16A14Q7RTX9 510 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 GLB1L2Q8IW92 636 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 EEF1AKMT1Q8WVE0 214 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 SECTM1Q8WVN6 248 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 NPY6RQ99463 290 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 S100A13Q99584 98 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 TAS2R13Q9NYV9 303 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 CALML5Q9NZT1 146 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF214Q9UL59 606 aaPredicted RBP7.2□□□□□ -1.26
COL4A5-205ENST00000483338 GPR52Q9Y2T5 361 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 ENPP4Q9Y6X5 453 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 ELOA3CA0A087WX78 387 aaPredicted RBP7.2□□□□□ -1.26
COL4A5-205ENST00000483338 TCRBV21S2A2A0A5A6 115 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 AGPAT2O15120 278 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 SURF4O15260 269 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 ALOX12BO75342 701 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 SDC1P18827 310 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 TLX1P31314 330 aaPredicted RBP7.2□□□□□ -1.26
COL4A5-205ENST00000483338 SCNN1AP37088 669 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 OR3A1P47881 315 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 CCL23P55773 120 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 PCBP4P57723 403 aaKnown RBP7.2□□□□□ -1.26
COL4A5-205ENST00000483338 RGNQ15493 299 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 C11orf87Q6NUJ2 197 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 TPGS1Q6ZTW0 290 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 UBE2R2Q712K3 238 aaPredicted RBP7.2□□□□□ -1.26
COL4A5-205ENST00000483338 FAM129CQ86XR2 697 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF610Q8N9Z0 462 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 MR1Q95460 341 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 ECHDC3Q96DC8 303 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 DTD2Q96FN9 168 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 KIRREL1Q96J84 757 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 HIST1H2BLQ99880 126 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 ADAM19Q9H013 955 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 POT1Q9NUX5 634 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 SEMA5BQ9P283 1151 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 TIMM13Q9Y5L4 95 aaPredicted RBP7.2□□□□□ -1.26
COL4A5-205ENST00000483338 SCN1AP35498 2009 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 TRPM7Q96QT4 1865 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 TMEM238C9JI98 176 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 PRODHO43272 600 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 HCRTO43612 131 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 FCGR3AP08637 254 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 SPARCP09486 303 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 PRPS2P11908 318 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 PKMP14618 531 aaKnown RBP7.2□□□□□ -1.26
COL4A5-205ENST00000483338 TYRP1P17643 537 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 EFNA5P52803 228 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 BTG2P78543 158 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 PCBP2Q15366 365 aaKnown RBP eCLIP7.2□□□□□ -1.266e-6■■■■□ 23.1
COL4A5-205ENST00000483338 TMPPEQ6ZT21 453 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 TAF8Q7Z7C8 310 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 SYT9Q86SS6 491 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 CMTM4Q8IZR5 234 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 PAQR4Q8N4S7 273 aaPredicted RBP7.2□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF283Q8N7M2 679 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 OR7G2Q8NG99 324 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 PIK3IP1Q96FE7 263 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 P2RY12Q9H244 342 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 ISG20L2Q9H9L3 353 aaKnown RBP7.2□□□□□ -1.26
COL4A5-205ENST00000483338 LMAN1LQ9HAT1 526 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 LPAR2Q9HBW0 351 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 SEPSECSQ9HD40 501 aaKnown RBP7.2□□□□□ -1.26
COL4A5-205ENST00000483338 LPAR3Q9UBY5 353 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 FLVCR1Q9Y5Y0 555 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 KPTNQ9Y664 436 aa7.2□□□□□ -1.26
COL4A5-205ENST00000483338 PRRC2BQ5JSZ5 2229 aaKnown RBP7.2□□□□□ -1.26
COL4A5-205ENST00000483338 SMCO3A2RU48 225 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 GABARAPH6UMI1 98 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 LDB2O43679 373 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 OR10H3O60404 316 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 TSPAN3O60637 253 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 RPLP2P05387 115 aaKnown RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 CD14P08571 375 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 RENBPP51606 427 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 CCR4P51679 360 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 OAZ1P54368 228 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 LIM2P55344 173 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 LSM11P83369 360 aaKnown RBP eCLIP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 FOXK1P85037 733 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 PRKCZQ05513 592 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 MTAPQ13126 283 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 TAF13Q15543 124 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 AKR1C8PQ5T2L2 129 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ABHD15Q6UXT9 468 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 WDR88Q6ZMY6 472 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 SLC30A7Q8NEW0 376 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 NUDT10Q8NFP7 164 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 OR13C8Q8NGS7 320 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 OIT3Q8WWZ8 545 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 GEMIN6Q8WXD5 167 aaKnown RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ASB13Q8WXK3 278 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 RELTQ969Z4 430 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 FAM210BQ96KR6 192 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 SMAD5Q99717 465 aaKnown RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 CHST6Q9GZX3 395 aa7.19□□□□□ -1.26
COL4A5-205ENST00000483338 ZNF346Q9UL40 294 aaKnown RBP7.19□□□□□ -1.26
COL4A5-205ENST00000483338 CHD3Q12873 2000 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms