RNA–Protein interactions for RNA: ENST00000483212.1

USP4-210, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 2

Gene USP4, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-210ENST00000483212 THAP5Q7Z6K1 395 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 IGFN1Q86VF2 1251 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 C10orf53Q8N6V4 93 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 Q8NA96 180 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 FAM98AQ8NCA5 519 aaKnown RBP7.39□□□□□ -1.23
USP4-210ENST00000483212 SETD9Q8NE22 299 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 OR2T33Q8NG76 320 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 RHOXF1Q8NHV9 184 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 NEIL3Q8TAT5 605 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 FAM81AQ8TBF8 368 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 DDOQ99489 341 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 APOL4Q9BPW4 351 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 ASPNQ9BXN1 380 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 POLDIP3Q9BY77 421 aaKnown RBP7.39□□□□□ -1.23
USP4-210ENST00000483212 SRXN1Q9BYN0 137 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 DEFB127Q9H1M4 99 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 CHST11Q9NPF2 352 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 B3GAT1Q9P2W7 334 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 SPRR3Q9UBC9 169 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 BAIAP2Q9UQB8 552 aa7.39□□□□□ -1.23
USP4-210ENST00000483212 CNTRLQ7Z7A1 2325 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 TRGV5A0A0B4J1U4 118 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 LOC102725191A0A1B0GVB3 256 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 TRIM64A6NGJ6 449 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 NPIPB13A6NJU9 1138 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 AQP7P3A6NL99 342 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 GJE1A6NN92 205 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 NPIPB4C9JG80 1138 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 IMPA2O14732 288 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 TNFSF11O14788 317 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 SMAD9O15198 467 aaKnown RBP7.38□□□□□ -1.23
USP4-210ENST00000483212 DNPH1O43598 174 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 RAMP1O60894 148 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 AKR7A3O95154 331 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 SLC2A10O95528 541 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 ACTL6AO96019 429 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 F13BP05160 661 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 CD14P08571 375 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 HLA-DOBP13765 273 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 POU3F2P20265 443 aaPredicted RBP7.38□□□□□ -1.23
USP4-210ENST00000483212 OR2B6P58173 313 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 SNRPGP62308 76 aaKnown RBP7.38□□□□□ -1.23
USP4-210ENST00000483212 ERVK-25P63136 954 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 SLC35A1P78382 337 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 FOXK2Q01167 660 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 IL5RAQ01344 420 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 PMS2P3Q13401 168 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 NADK2Q4G0N4 442 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 ALG10Q5BKT4 473 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 SLC25A30Q5SVS4 291 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 AADACL4Q5VUY2 407 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 ZNF324BQ6AW86 544 aaPredicted RBP7.38□□□□□ -1.23
USP4-210ENST00000483212 VASNQ6EMK4 673 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 PAQR6Q6TCH4 344 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 ESPNLQ6ZVH7 1005 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 H1FNTQ75WM6 255 aaPredicted RBP7.38□□□□□ -1.23
USP4-210ENST00000483212 WDFY1Q8IWB7 410 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 DEPDC4Q8N2C3 294 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 FAM26EQ8N5C1 309 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 TMEM99Q8N816 258 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 EXD3Q8N9H8 876 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 OR52L1Q8NGH7 329 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 OR8J1Q8NGP2 316 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 OR2V1Q8NHB1 315 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 C9orf43Q8TAL5 461 aaPredicted RBP7.38□□□□□ -1.23
USP4-210ENST00000483212 CNIH3Q8TBE1 160 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 TRUB1Q8WWH5 349 aaKnown RBP7.38□□□□□ -1.23
USP4-210ENST00000483212 SMPDL3BQ92485 455 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 ZNF566Q969W8 418 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 PNPLA2Q96AD5 504 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 TSPAN32Q96QS1 320 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 KATNB1Q9BVA0 655 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 IFT27Q9BW83 186 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 TAPBPLQ9BX59 468 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 CMC2Q9NRP2 79 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 RASSF1Q9NS23 344 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 PNPLA3Q9NST1 481 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 TVP23BQ9NYZ1 205 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 B3GALT5Q9Y2C3 310 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 ADAM18Q9Y3Q7 739 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 IER3IP1Q9Y5U9 82 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 MPDZO75970 2070 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 ITPR1Q14643 2758 aa7.38□□□□□ -1.23
USP4-210ENST00000483212 MED12Q93074 2177 aa7.37□□□□□ -1.23
USP4-210ENST00000483212 BOD1L1Q8NFC6 3051 aa7.37□□□□□ -1.23
USP4-210ENST00000483212 TEX13CA0A0J9YWL9 993 aa7.37□□□□□ -1.23
USP4-210ENST00000483212 KDM4EB2RXH2 506 aaPredicted RBP7.37□□□□□ -1.23
USP4-210ENST00000483212 BLOC1S5-TXNDC5H3BN57 136 aa7.37□□□□□ -1.23
USP4-210ENST00000483212 SULT2B1O00204 365 aa7.37□□□□□ -1.23
USP4-210ENST00000483212 AQP7O14520 342 aa7.37□□□□□ -1.23
USP4-210ENST00000483212 EIF1AYO14602 144 aaKnown RBP7.37□□□□□ -1.23
USP4-210ENST00000483212 TFECO14948 347 aaPredicted RBP7.37□□□□□ -1.23
USP4-210ENST00000483212 SEC14L5O43304 696 aa7.37□□□□□ -1.23
USP4-210ENST00000483212 TRAF3IP2O43734 574 aaPredicted RBP7.37□□□□□ -1.23
USP4-210ENST00000483212 IDH3BO43837 385 aa7.37□□□□□ -1.23
USP4-210ENST00000483212 CXCL13O43927 109 aa7.37□□□□□ -1.23
USP4-210ENST00000483212 HIST1H2ABP04908 130 aa7.37□□□□□ -1.23
USP4-210ENST00000483212 HMGN1P05114 100 aa7.37□□□□□ -1.23
USP4-210ENST00000483212 ADORA3P0DMS8 318 aa7.37□□□□□ -1.23
USP4-210ENST00000483212 CPN1P15169 458 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms