RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 ARR3P36575 388 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 ACAA2P42765 397 aaKnown RBP11.05□□□□□ -0.64
TMEM54-206ENST00000482771 GPR6P46095 362 aaPredicted RBP11.05□□□□□ -0.64
TMEM54-206ENST00000482771 SH3BGRP55822 239 aaPredicted RBP11.05□□□□□ -0.64
TMEM54-206ENST00000482771 CLDN17P56750 224 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 COPZ1P61923 177 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 SCGB2A2Q13296 93 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 SMU1Q2TAY7 513 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 ELFN2Q5R3F8 820 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 C1orf140Q5VVS0 124 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 KRT80Q6KB66 452 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 SHQ1Q6PI26 577 aaKnown RBP11.05□□□□□ -0.64
TMEM54-206ENST00000482771 IL17RDQ8NFM7 739 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 CLDND2Q8NHS1 167 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 FAM216AQ8WUB2 273 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 SLC25A36Q96CQ1 311 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 ZNF837Q96EG3 531 aaPredicted RBP11.05□□□□□ -0.64
TMEM54-206ENST00000482771 APOPT1Q96IL0 206 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 LRRC37BQ96QE4 947 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 PARD6BQ9BYG5 372 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 GRIP1Q9Y3R0 1128 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 SPEF1Q9Y4P9 236 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 WNK2Q9Y3S1 2297 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 TGP01266 2768 aa11.05□□□□□ -0.64
TMEM54-206ENST00000482771 ZNF503-AS2A6NEH8 195 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 RPL36A-HNRNPH2H7BZ11 118 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 TRIM77I1YAP6 450 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 WNT9BO14905 357 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 HPXP02790 462 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 DBIP07108 87 aaKnown RBP11.04□□□□□ -0.64
TMEM54-206ENST00000482771 NR4A1P22736 598 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 S100A3P33764 101 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 SERPINB5P36952 375 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 CAPZA2P47755 286 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 SNTB2Q13425 540 aaKnown RBP11.04□□□□□ -0.64
TMEM54-206ENST00000482771 MSMPQ1L6U9 139 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 SPANXN4Q5MJ08 99 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 WBP2NLQ6ICG8 309 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 MDP1Q86V88 176 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 PEX5LQ8IYB4 626 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 ZNF440Q8IYI8 595 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 MREGQ8N565 214 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 TCP10LQ8TDR4 215 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 MRPL37Q9BZE1 423 aaKnown RBP11.04□□□□□ -0.64
TMEM54-206ENST00000482771 RACGAP1Q9H0H5 632 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 MS4A5Q9H3V2 200 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 GPR35Q9HC97 309 aa11.04□□□□□ -0.64
TMEM54-206ENST00000482771 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.04□□□□□ -0.64
TMEM54-206ENST00000482771 V9GYY5 206 aaPredicted RBP11.04□□□□□ -0.64
TMEM54-206ENST00000482771 CDHR4A6H8M9 788 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 CCDC154A6NI56 674 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 SYNGR3O43761 229 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 SLC43A1O75387 559 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 ZNF432O94892 652 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 MSMBP08118 114 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 NUDT17P0C025 328 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 CREB1P16220 341 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 ZNF43P17038 809 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 RPS4Y1P22090 263 aaKnown RBP11.03□□□□□ -0.64
TMEM54-206ENST00000482771 ALDH3B1P43353 468 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 EVX1P49640 407 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 SEC24CP53992 1094 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 TMEM33P57088 247 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 PDCD2Q16342 344 aaPredicted RBP11.03□□□□□ -0.64
TMEM54-206ENST00000482771 CEACAM16Q2WEN9 425 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 SLC9B1Q4ZJI4 515 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 COX20Q5RI15 118 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 ZNF621Q6ZSS3 439 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 VRK2Q86Y07 508 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 CCDC36Q8IYA8 594 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 GPR137CQ8N3F9 429 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 ANKK1Q8NFD2 765 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 OR52P1PQ8NH57 321 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 RDH5Q92781 318 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 MRPL24Q96A35 216 aaKnown RBP11.03□□□□□ -0.64
TMEM54-206ENST00000482771 TESCQ96BS2 214 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 NOX3Q9HBY0 568 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 MKS1Q9NXB0 559 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 PRDM4Q9UKN5 801 aa11.03□□□□□ -0.64
TMEM54-206ENST00000482771 M0R233 179 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 PPIHO43447 177 aaKnown RBP11.02□□□□□ -0.65
TMEM54-206ENST00000482771 FRS3O43559 492 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 ITM2AO43736 263 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 NPIPB7O75200 414 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 AVPP01185 164 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 GSNP06396 782 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 BPGMP07738 259 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 GAAP10253 952 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 SAGP10523 405 aaPredicted RBP11.02□□□□□ -0.65
TMEM54-206ENST00000482771 PNMTP11086 282 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 PRG2P13727 222 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 NCF2P19878 526 aaPredicted RBP11.02□□□□□ -0.65
TMEM54-206ENST00000482771 EPHA1P21709 976 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 ACHEP22303 614 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 ANXA11P50995 505 aaKnown RBP11.02□□□□□ -0.65
TMEM54-206ENST00000482771 HILS1P60008 231 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 LMO4P61968 165 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 POU3F1Q03052 451 aaPredicted RBP11.02□□□□□ -0.65
TMEM54-206ENST00000482771 PIGFQ07326 219 aa11.02□□□□□ -0.65
TMEM54-206ENST00000482771 C1DQ13901 141 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms