RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 SYPL2Q5VXT5 272 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 GGNBP1Q5YKI7 109 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 STUMQ69YW2 141 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 LRRN1Q6UXK5 716 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 DPY19L2P2Q6ZN68 376 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 ZNF836Q6ZNA1 936 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 AHSA2Q719I0 299 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 P4HA3Q7Z4N8 544 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 DPPA2Q7Z7J5 298 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 LYG2Q86SG7 212 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 GPBP1Q86WP2 473 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 MARCH9Q86YJ5 346 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 CALHM1Q8IU99 346 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 WDFY1Q8IWB7 410 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 RIBC1Q8N443 379 aaPredicted RBP3.61□□□□□ -1.83
VPS41-212ENST00000482217 PRR26Q8N8Z3 221 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 ACVR1CQ8NER5 493 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 NOXO1Q8NFA2 376 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 OR5L2Q8NGL0 311 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 FGFBP3Q8TAT2 258 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 PLPPR1Q8TBJ4 325 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 PPP4R1Q8TF05 950 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 NEIL2Q969S2 332 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 UPRTQ96BW1 309 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 SCRN2Q96FV2 425 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 ZNF597Q96LX8 424 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 ZNF778Q96MU6 729 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 WFIKKN1Q96NZ8 548 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 S1PR3Q99500 378 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 EBNA1BP2Q99848 306 aaKnown RBP3.61□□□□□ -1.83
VPS41-212ENST00000482217 MICU1Q9BPX6 476 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 BTBD10Q9BSF8 475 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 SLC29A3Q9BZD2 475 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 FAM234AQ9H0X4 552 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 SYT4Q9H2B2 425 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 OR51B5Q9H339 312 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 PIGUQ9H490 435 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 TRABDQ9H4I3 376 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 PLAC1Q9HBJ0 212 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 NMRAL1Q9HBL8 299 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 ISYNA1Q9NPH2 558 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 NANSQ9NR45 359 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 C1orf109Q9NX04 203 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 BABAM2Q9NXR7 383 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 TCF19Q9Y242 345 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 LOXL2Q9Y4K0 774 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 NME7Q9Y5B8 376 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 PTPRCP08575 1304 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 NUP155O75694 1391 aa3.61□□□□□ -1.83
VPS41-212ENST00000482217 TRBV9A0A0B4J1U6 114 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 RPS10-NUDT3A0A1W2PQS6 291 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 A0A1W2PRD5 423 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 TVP23AA6NH52 213 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 LINC00587B1AMM8 73 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 ZNF732B4DXR9 585 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 SULT1C2O00338 296 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 TOM1O60784 492 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 GRAP2O75791 330 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 WISP2O76076 250 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 SRP72O76094 671 aaKnown RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 SOX30O94993 753 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 NDUFB4O95168 129 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 MPZL1O95297 269 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 CRYZL1O95825 349 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 CD59P13987 128 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 IVDP26440 423 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 CRABP1P29762 137 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 PCK1P35558 622 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 GPR1P46091 355 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 BDKRB1P46663 353 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 GLIPR1P48060 266 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 RFX2P48378 723 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 FGF8P55075 233 aaPredicted RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 RANP62826 216 aaKnown RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 MRPS6P82932 125 aaKnown RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 SRYQ05066 204 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 TNFRSF9Q07011 255 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 KLC1Q07866 573 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 KLRB1Q12918 225 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 MAD2L1Q13257 205 aaPredicted RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 NFATC4Q14934 902 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 SLC36A2Q495M3 483 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 GCSAMLQ5JQS6 135 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 DMKNQ6E0U4 476 aaPredicted RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 ANKRD26P1Q6NSI1 321 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 ZNF530Q6P9A1 599 aaPredicted RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 LCLAT1Q6UWP7 414 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 C17orf107Q6ZR85 190 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 LANCL3Q6ZV70 420 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 CTU1Q7Z7A3 348 aaKnown RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 RALGPS2Q86X27 583 aaPredicted RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 COMMD2Q86X83 199 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 PLA2G4DQ86XP0 818 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 APRG1Q8IVJ8 170 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 PDIK1LQ8N165 341 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 RYBPQ8N488 228 aaPredicted RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 TMEM251Q8N6I4 163 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 Q8N9G6 341 aaPredicted RBP3.6□□□□□ -1.83
VPS41-212ENST00000482217 SCCPDHQ8NBX0 429 aa3.6□□□□□ -1.83
VPS41-212ENST00000482217 ZNF738Q8NE65 137 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms