RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 TRBV5-3A0A0A0MS03 114 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 GTF2E2P29084 291 aaKnown RBP16.18■□□□□ 0.18
CLK1-211ENST00000481641 AQP1P29972 269 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 PRKAR1BP31321 381 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 MST1LQ2TV78 715 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 REEP3Q6NUK4 255 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 DHRS4L2Q6PKH6 230 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 CLEC2AQ6UVW9 174 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 SLC35B4Q969S0 331 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 FBXO17Q96EF6 278 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 THOC1Q96FV9 657 aaKnown RBP16.18■□□□□ 0.18
CLK1-211ENST00000481641 BOD1Q96IK1 185 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 ATP6V1G3Q96LB4 118 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 NELFAQ9H3P2 528 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 SEC61A2Q9H9S3 476 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 B3GAT1Q9P2W7 334 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 RTTNQ86VV8 2226 aa16.18■□□□□ 0.18
CLK1-211ENST00000481641 FBN1P35555 2871 aaKnown RBP16.17■□□□□ 0.18
CLK1-211ENST00000481641 YLPM1P49750 1951 aaKnown RBP16.17■□□□□ 0.18
CLK1-211ENST00000481641 H7C417 338 aa16.17■□□□□ 0.18
CLK1-211ENST00000481641 M0R082 166 aa16.17■□□□□ 0.18
CLK1-211ENST00000481641 ZNF432O94892 652 aa16.17■□□□□ 0.18
CLK1-211ENST00000481641 ZNF43P17038 809 aa16.17■□□□□ 0.18
CLK1-211ENST00000481641 GRPRP30550 384 aa16.17■□□□□ 0.18
CLK1-211ENST00000481641 UBE2NP61088 152 aaKnown RBP16.17■□□□□ 0.18
CLK1-211ENST00000481641 ROR2Q01974 943 aaKnown RBP16.17■□□□□ 0.18
CLK1-211ENST00000481641 SCARB2Q14108 478 aa16.17■□□□□ 0.18
CLK1-211ENST00000481641 ADRM1Q16186 407 aa16.17■□□□□ 0.18
CLK1-211ENST00000481641 HMBOX1Q6NT76 420 aa16.17■□□□□ 0.18
CLK1-211ENST00000481641 C6orf89Q6UWU4 347 aa16.17■□□□□ 0.18
CLK1-211ENST00000481641 ZNF417Q8TAU3 575 aa16.17■□□□□ 0.18
CLK1-211ENST00000481641 RNF217Q8TC41 542 aa16.17■□□□□ 0.18
CLK1-211ENST00000481641 NANOS1Q8WY41 292 aaKnown RBP16.17■□□□□ 0.18
CLK1-211ENST00000481641 ZNF837Q96EG3 531 aaPredicted RBP16.17■□□□□ 0.18
CLK1-211ENST00000481641 OXGR1Q96P68 337 aa16.17■□□□□ 0.18
CLK1-211ENST00000481641 SLC38A2Q96QD8 506 aa16.17■□□□□ 0.18
CLK1-211ENST00000481641 ZNF587Q96SQ5 575 aaPredicted RBP16.17■□□□□ 0.18
CLK1-211ENST00000481641 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.17■□□□□ 0.18
CLK1-211ENST00000481641 ARF1P84077 181 aaKnown RBP16.16■□□□□ 0.18
CLK1-211ENST00000481641 IL1RL1Q01638 556 aa16.16■□□□□ 0.18
CLK1-211ENST00000481641 CHRNB3Q05901 458 aa16.16■□□□□ 0.18
CLK1-211ENST00000481641 C1DQ13901 141 aaKnown RBP16.16■□□□□ 0.18
CLK1-211ENST00000481641 SWI5Q1ZZU3 235 aa16.16■□□□□ 0.18
CLK1-211ENST00000481641 ALG10BQ5I7T1 473 aa16.16■□□□□ 0.18
CLK1-211ENST00000481641 KRT73Q86Y46 540 aa16.16■□□□□ 0.18
CLK1-211ENST00000481641 LSMEM1Q8N8F7 131 aa16.16■□□□□ 0.18
CLK1-211ENST00000481641 DYDC1Q8WWB3 177 aa16.16■□□□□ 0.18
CLK1-211ENST00000481641 SLC38A4Q969I6 547 aa16.16■□□□□ 0.18
CLK1-211ENST00000481641 LINC00470Q9BZP3 86 aa16.16■□□□□ 0.18
CLK1-211ENST00000481641 C12orf10Q9HB07 376 aa16.16■□□□□ 0.18
CLK1-211ENST00000481641 OBP2BQ9NPH6 170 aa16.16■□□□□ 0.18
CLK1-211ENST00000481641 PMF1-BGLAPU3KQ54 211 aa16.16■□□□□ 0.18
CLK1-211ENST00000481641 ATRQ13535 2644 aa16.16■□□□□ 0.18
CLK1-211ENST00000481641 TRAV36DV7A0A075B6V5 113 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 OR6C65A6NJZ3 312 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 AIM2O14862 343 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 TLX2O43763 284 aaPredicted RBP16.15■□□□□ 0.18
CLK1-211ENST00000481641 TPST2O60704 377 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 FZD7O75084 574 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 HPRP00739 348 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 CELA3BP08861 270 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 CECR9P0C854 216 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 HLA-DOBP13765 273 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 GPX2P18283 190 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 PPIBP23284 216 aaKnown RBP16.15■□□□□ 0.18
CLK1-211ENST00000481641 SLC6A2P23975 617 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 CALCRP30988 508 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 SQLEQ14534 574 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 OR1Q1Q15612 314 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 PHYHD1Q5SRE7 291 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 FAM69AQ5T7M9 428 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 ANKRD16Q6P6B7 361 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 VHLLQ6RSH7 139 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 DLEU7Q6UYE1 221 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 H1FNTQ75WM6 255 aaPredicted RBP16.15■□□□□ 0.18
CLK1-211ENST00000481641 MYPOPQ86VE0 399 aaPredicted RBP16.15■□□□□ 0.18
CLK1-211ENST00000481641 DNAJA4Q8WW22 397 aaPredicted RBP16.15■□□□□ 0.18
CLK1-211ENST00000481641 FAM168AQ92567 244 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 CPPED1Q9BRF8 314 aaPredicted RBP16.15■□□□□ 0.18
CLK1-211ENST00000481641 SPATA5L1Q9BVQ7 753 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 TMEM38AQ9H6F2 299 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 GPR35Q9HC97 309 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 KLHL14Q9P2G3 628 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 RCE1Q9Y256 329 aa16.15■□□□□ 0.18
CLK1-211ENST00000481641 COL6A5A8TX70 2615 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 ARPC4-TTLL3A0A0A6YYG9 625 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 ZNF503-AS2A6NEH8 195 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 MS4A18H0YCH9 400 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 OR2T1O43869 369 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 SLC43A1O75387 559 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 SEC14L2O76054 403 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 ATP4BP51164 291 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 EFNA4P52798 201 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 RGS8P57771 180 aaPredicted RBP16.14■□□□□ 0.17
CLK1-211ENST00000481641 DSCR9P59020 149 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 NAAAQ02083 359 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 SELPLGQ14242 412 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 CEACAM16Q2WEN9 425 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 TMEM249Q2WGJ8 235 aa16.14■□□□□ 0.17
CLK1-211ENST00000481641 MS4A18Q3C1V0 323 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms