RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 A0A0B4J2E0 115 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 A0A1B0GX12 115 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 FTCDNL1E5RQL4 147 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 EDF1O60869 148 aaKnown RBP10.04□□□□□ -0.8
CCM2-213ENST00000480658 RAMP1O60894 148 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 IFNA14P01570 189 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 C1QCP02747 245 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 NUDT7P0C024 238 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 NQO1P15559 274 aaKnown RBP10.04□□□□□ -0.8
CCM2-213ENST00000480658 APOBEC3AP31941 199 aaPredicted RBP10.04□□□□□ -0.8
CCM2-213ENST00000480658 FABP6P51161 128 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 IL1RL1Q01638 556 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 DMTNQ08495 405 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 RAB35Q15286 201 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 RUNDC3AQ59EK9 446 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 NIPAL3Q6P499 406 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 CLEC2AQ6UVW9 174 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 HDDC2Q7Z4H3 204 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 UEVLDQ8IX04 471 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 GPR137CQ8N3F9 429 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 OR1K1Q8NGR3 316 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 SLC26A7Q8TE54 656 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 NANOS1Q8WY41 292 aaKnown RBP10.04□□□□□ -0.8
CCM2-213ENST00000480658 SLC25A36Q96CQ1 311 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 MPP4Q96JB8 637 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 LRR1Q96L50 414 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 ANKRD27Q96NW4 1050 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 ZNF385AQ96PM9 386 aaKnown RBP10.04□□□□□ -0.8
CCM2-213ENST00000480658 CGREF1Q99674 301 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 SLC19A3Q9BZV2 496 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 POLR2J2Q9GZM3 115 aaKnown RBP10.04□□□□□ -0.8
CCM2-213ENST00000480658 POLR2J3Q9H1A7 115 aaKnown RBP10.04□□□□□ -0.8
CCM2-213ENST00000480658 GSX1Q9H4S2 264 aaPredicted RBP10.04□□□□□ -0.8
CCM2-213ENST00000480658 DENND2DQ9H6A0 471 aaPredicted RBP10.04□□□□□ -0.8
CCM2-213ENST00000480658 AP3M1Q9Y2T2 418 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 NOX1Q9Y5S8 564 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 VPS13CQ709C8 3753 aa10.04□□□□□ -0.8
CCM2-213ENST00000480658 A0A0G2JND7 137 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 A0A1B0GWA3 101 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 TRIM64A6NGJ6 449 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 TRIM64BA6NI03 449 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 SMAD7O15105 426 aaKnown RBP10.03□□□□□ -0.8
CCM2-213ENST00000480658 SLC22A2O15244 555 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 CHP2O43745 196 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 TLX2O43763 284 aaPredicted RBP10.03□□□□□ -0.8
CCM2-213ENST00000480658 PRG2P13727 222 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 H2AFXP16104 143 aaPredicted RBP10.03□□□□□ -0.8
CCM2-213ENST00000480658 SLC25A16P16260 332 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 HOXB4P17483 251 aaPredicted RBP10.03□□□□□ -0.8
CCM2-213ENST00000480658 EDNRAP25101 427 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 IFNA8P32881 189 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 ARR3P36575 388 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 P2RY4P51582 365 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 PCBP3P57721 371 aaKnown RBP10.03□□□□□ -0.8
CCM2-213ENST00000480658 SNRPD2P62316 118 aaKnown RBP10.03□□□□□ -0.8
CCM2-213ENST00000480658 BNIP2Q12982 314 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 AKAP6Q13023 2319 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 NFYCQ13952 458 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 TRMT5Q32P41 509 aaKnown RBP10.03□□□□□ -0.8
CCM2-213ENST00000480658 MMEL1Q495T6 779 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 HSP90B2PQ58FF3 399 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 PAGE3Q5JUK9 113 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 ERICH5Q6P6B1 374 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 DLEU7Q6UYE1 221 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 MSRB3Q8IXL7 192 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 ZIC4Q8N9L1 334 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 PCYOX1LQ8NBM8 494 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 OR4F15Q8NGB8 312 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 OR8J3Q8NGG0 315 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 RNF217Q8TC41 542 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 DNAJA3Q96EY1 480 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 ALKBH3Q96Q83 286 aaPredicted RBP10.03□□□□□ -0.8
CCM2-213ENST00000480658 SLC38A2Q96QD8 506 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 CPPED1Q9BRF8 314 aaPredicted RBP10.03□□□□□ -0.8
CCM2-213ENST00000480658 PTDSS2Q9BVG9 487 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 NPHS2Q9NP85 383 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 SLC52A3Q9NQ40 469 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 MRPL39Q9NYK5 338 aaKnown RBP10.03□□□□□ -0.8
CCM2-213ENST00000480658 USP22Q9UPT9 525 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 CHST2Q9Y4C5 530 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 SETD2Q9BYW2 2564 aaPredicted RBP10.03□□□□□ -0.8
CCM2-213ENST00000480658 ZFHX3Q15911 3703 aa10.03□□□□□ -0.8
CCM2-213ENST00000480658 MAP1AP78559 2803 aaPredicted RBP10.02□□□□□ -0.8
CCM2-213ENST00000480658 DSCAMO60469 2012 aa10.02□□□□□ -0.8
CCM2-213ENST00000480658 HTR3EA5X5Y0 456 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 ZNF99A8MXY4 864 aaPredicted RBP10.02□□□□□ -0.81
CCM2-213ENST00000480658 M0R082 166 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 NDUFS8O00217 210 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 MFN2O95140 757 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 OR6A2O95222 327 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 LY6G6DO95868 133 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 NR2C1P13056 603 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 NTF4P34130 210 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 PCGF2P35227 344 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 CDKN1AP38936 164 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 SELENOPP49908 381 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 CLDN17P56750 224 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 ROR2Q01974 943 aaKnown RBP10.02□□□□□ -0.81
CCM2-213ENST00000480658 EGR4Q05215 589 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 PUDPQ08623 228 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms