RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 CLEC6AQ6EIG7 209 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 RGS7BPQ6MZT1 257 aaPredicted RBP9.91□□□□□ -0.82
USP11-208ENST00000480104 ADAMTSL5Q6ZMM2 481 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 GPAT4Q86UL3 456 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 GALNT4Q8N4A0 578 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 OR4F6Q8NGB9 312 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 MGARPQ8TDB4 240 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 TMEM234Q8WY98 164 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 CDS1Q92903 461 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 DACT3Q96B18 629 aaPredicted RBP9.91□□□□□ -0.82
USP11-208ENST00000480104 MAP6Q96JE9 813 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 DCLRE1CQ96SD1 692 aaKnown RBP9.91□□□□□ -0.82
USP11-208ENST00000480104 BTBD2Q9BX70 525 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 CENPHQ9H3R5 247 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 SERHL2Q9H4I8 314 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 MIEF1Q9NQG6 463 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 B3GNT2Q9NY97 397 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 GRID1Q9ULK0 1009 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 TRAPPC4Q9Y296 219 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 DTNAQ9Y4J8 743 aa9.91□□□□□ -0.82
USP11-208ENST00000480104 IGLV3-9A0A075B6K5 115 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 NPIPB9F8W1W9 429 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 OR8G3PP0DMU2 310 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 THRBP10828 461 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 CD79AP11912 226 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 APOBEC1P41238 236 aaKnown RBP9.9□□□□□ -0.82
USP11-208ENST00000480104 ATP12AP54707 1039 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 FGF12P61328 243 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 GNB2P62879 340 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 C2orf80Q0P641 193 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 PRAMEF8Q5VWM4 474 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 PRAMEF7Q5VXH5 474 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 LETMD1Q6P1Q0 360 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 NIPAL3Q6P499 406 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 CMC1Q7Z7K0 106 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 KLHDC1Q8N7A1 406 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 TMEM99Q8N816 258 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 OR4F17Q8NGA8 305 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 ZNF75AQ96N20 296 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 OR4F4Q96R69 305 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 HOXD1Q9GZZ0 328 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 NSMCE4AQ9NXX6 385 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 SLCO1C1Q9NYB5 712 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 TAS2R7Q9NYW3 318 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 CPSF2Q9P2I0 782 aaKnown RBP9.9□□□□□ -0.82
USP11-208ENST00000480104 NFU1Q9UMS0 254 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 TRIM33Q9UPN9 1127 aa9.9□□□□□ -0.82
USP11-208ENST00000480104 TNPO3Q9Y5L0 923 aaKnown RBP9.9□□□□□ -0.82
USP11-208ENST00000480104 SLC22A23A1A5C7 686 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 AKR7A3O95154 331 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 MBD3O95983 291 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 HOXD3P31249 432 aaPredicted RBP9.89□□□□□ -0.83
USP11-208ENST00000480104 CLK1P49759 484 aaKnown RBP9.89□□□□□ -0.83
USP11-208ENST00000480104 EFNB2P52799 333 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 ACSM2AQ08AH3 577 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 GSG1Q2KHT4 349 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 TMEM155Q4W5P6 130 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 FAM209AQ5JX71 171 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 EXOSC6Q5RKV6 272 aaKnown RBP9.89□□□□□ -0.83
USP11-208ENST00000480104 ACSM2BQ68CK6 577 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 ZFAND6Q6FIF0 208 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 SLC35E4Q6ICL7 350 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 C6orf89Q6UWU4 347 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 LDLRAD3Q86YD5 345 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 ANKMY2Q8IV38 441 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 WFDC9Q8NEX5 89 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 SYNPRQ8TBG9 265 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 RAB40AQ8WXH6 277 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 LRTOMTQ8WZ04 291 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 ZNF837Q96EG3 531 aaPredicted RBP9.89□□□□□ -0.83
USP11-208ENST00000480104 CHMP6Q96FZ7 201 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 APIPQ96GX9 242 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 SF3B5Q9BWJ5 86 aaKnown RBP9.89□□□□□ -0.83
USP11-208ENST00000480104 LINC00470Q9BZP3 86 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 FBLN5Q9UBX5 448 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 SLC7A8Q9UHI5 535 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 PCTPQ9UKL6 214 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 SNX6Q9UNH7 406 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 LRCH1Q9Y2L9 728 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 TEX264Q9Y6I9 313 aa9.89□□□□□ -0.83
USP11-208ENST00000480104 ANKRD28O15084 1053 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 TM9SF1O15321 606 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 SPRY3O43610 288 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 IGHV1-46P01743 117 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 ANXA4P09525 319 aaPredicted RBP9.88□□□□□ -0.83
USP11-208ENST00000480104 UBTFL6P0CB48 400 aaPredicted RBP9.88□□□□□ -0.83
USP11-208ENST00000480104 ZNF250P15622 560 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 FNTAP49354 379 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 ERVS71-1P61550 626 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 PIGFQ07326 219 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 ILF2Q12905 390 aaKnown RBP9.88□□□□□ -0.83
USP11-208ENST00000480104 DCTN2Q13561 401 aaKnown RBP9.88□□□□□ -0.83
USP11-208ENST00000480104 ZMYND11Q15326 602 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 PDZK1Q5T2W1 519 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 METTL2BQ6P1Q9 378 aaKnown RBP9.88□□□□□ -0.83
USP11-208ENST00000480104 C1orf122Q6ZSJ8 110 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 CCDC36Q8IYA8 594 aa9.88□□□□□ -0.83
USP11-208ENST00000480104 MUC20Q8N307 709 aaPredicted RBP9.88□□□□□ -0.83
USP11-208ENST00000480104 PTGR2Q8N8N7 351 aaPredicted RBP9.88□□□□□ -0.83
USP11-208ENST00000480104 RHEBL1Q8TAI7 183 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms