RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 NCALDP61601 193 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 KLF10Q13118 480 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 CYLC2Q14093 348 aaPredicted RBP20.54■□□□□ 0.88
C9orf3-215ENST00000478473 INTS11Q5TA45 600 aaKnown RBP20.54■□□□□ 0.88
C9orf3-215ENST00000478473 KLHL17Q6TDP4 642 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 RANBP3LQ86VV4 465 aaPredicted RBP20.54■□□□□ 0.88
C9orf3-215ENST00000478473 OR10A6Q8NH74 314 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 LRRC58Q96CX6 371 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 SH3GL1Q99961 368 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 PCDHAC1Q9H158 963 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 OBP2BQ9NPH6 170 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 SLC13A4Q9UKG4 626 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 LAMP3Q9UQV4 416 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 CORINQ9Y5Q5 1042 aa20.54■□□□□ 0.88
C9orf3-215ENST00000478473 MAGED1Q9Y5V3 778 aaPredicted RBP20.54■□□□□ 0.88
C9orf3-215ENST00000478473 NIPBLQ6KC79 2804 aaeCLIP20.54■□□□□ 0.88
C9orf3-215ENST00000478473 RPL36A-HNRNPH2H7BZ11 118 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 ABCD4O14678 606 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 SLC22A2O15244 555 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 INHBBP09529 407 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 CD247P20963 164 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 SELENOPP49908 381 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 CRYBA2P53672 197 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 VMACQ2NL98 169 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 NHLRC1Q6VVB1 395 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 H1FNTQ75WM6 255 aaPredicted RBP20.53■□□□□ 0.88
C9orf3-215ENST00000478473 SCAIQ8N9R8 606 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 SMYD1Q8NB12 490 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 MAGEE2Q8TD90 523 aaPredicted RBP20.53■□□□□ 0.88
C9orf3-215ENST00000478473 SLC25A36Q96CQ1 311 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 EPYCQ99645 322 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 MED4Q9NPJ6 270 aa20.53■□□□□ 0.88
C9orf3-215ENST00000478473 CISD1Q9NZ45 108 aaKnown RBP20.53■□□□□ 0.88
C9orf3-215ENST00000478473 M0R082 166 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 CD8AP01732 235 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 ZNF43P17038 809 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 GRPRP30550 384 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 CDH12P55289 794 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 SLC25A3Q00325 362 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 LTBQ06643 244 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 MAPRE2Q15555 327 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 NPTX1Q15818 432 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 ZNF417Q8TAU3 575 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 TAMM41Q96BW9 452 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 Q96MF0 132 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 ZNF587Q96SQ5 575 aaPredicted RBP20.52■□□□□ 0.88
C9orf3-215ENST00000478473 BDH2Q9BUT1 245 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 TRAF4Q9BUZ4 470 aaPredicted RBP20.52■□□□□ 0.88
C9orf3-215ENST00000478473 GSX1Q9H4S2 264 aaPredicted RBP20.52■□□□□ 0.88
C9orf3-215ENST00000478473 SEC14L4Q9UDX3 406 aa20.52■□□□□ 0.88
C9orf3-215ENST00000478473 LYPD3O95274 346 aa20.51■□□□□ 0.87
C9orf3-215ENST00000478473 BGLAPP02818 100 aa20.51■□□□□ 0.87
C9orf3-215ENST00000478473 GTF2E2P29084 291 aaKnown RBP20.51■□□□□ 0.87
C9orf3-215ENST00000478473 PRPS1P60891 318 aa20.51■□□□□ 0.87
C9orf3-215ENST00000478473 GUCY1A3Q02108 690 aa20.51■□□□□ 0.87
C9orf3-215ENST00000478473 VEZF1Q14119 521 aa20.51■□□□□ 0.87
C9orf3-215ENST00000478473 ETFDHQ16134 617 aa20.51■□□□□ 0.87
C9orf3-215ENST00000478473 LINGO2Q7L985 606 aa20.51■□□□□ 0.87
C9orf3-215ENST00000478473 KDM8Q8N371 416 aa20.51■□□□□ 0.87
C9orf3-215ENST00000478473 OR6T1Q8NGN1 323 aa20.51■□□□□ 0.87
C9orf3-215ENST00000478473 RASSF5Q8WWW0 418 aa20.51■□□□□ 0.87
C9orf3-215ENST00000478473 MCHR1Q99705 422 aa20.51■□□□□ 0.87
C9orf3-215ENST00000478473 SELENONQ9NZV5 590 aa20.51■□□□□ 0.87
C9orf3-215ENST00000478473 ZNF587BE7ETH6 402 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 MS4A18H0YCH9 400 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 M0R3H8 397 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 TRAF3IP2O43734 574 aaPredicted RBP20.5■□□□□ 0.87
C9orf3-215ENST00000478473 CHP2O43745 196 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 UPK3AO75631 287 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 VIMP08670 466 aaKnown RBP20.5■□□□□ 0.87
C9orf3-215ENST00000478473 HOXB1P14653 301 aaPredicted RBP20.5■□□□□ 0.87
C9orf3-215ENST00000478473 ZNF83P51522 516 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 CDH11P55287 796 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 SH3BGRP55822 239 aaPredicted RBP20.5■□□□□ 0.87
C9orf3-215ENST00000478473 MS4A18Q3C1V0 323 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 C9orf135Q5VTT2 229 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 NIPAL3Q6P499 406 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 OR4D11Q8NGI4 311 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 OR1K1Q8NGR3 316 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 ZNF426Q9BUY5 554 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 FAIMQ9NVQ4 179 aa20.5■□□□□ 0.87
C9orf3-215ENST00000478473 MRPL39Q9NYK5 338 aaKnown RBP20.5■□□□□ 0.87
C9orf3-215ENST00000478473 ARPC4-TTLL3A0A0A6YYG9 625 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 A0A1W2PR80 420 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 FAM171A2A8MVW0 826 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 E7EQL1 145 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 MT-ATP6P00846 226 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 OPN1SWP03999 348 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 ATP5J2P56134 94 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 CLDN17P56750 224 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 KRTAP21-3Q3LHN1 58 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 C3orf36Q3SXR2 165 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 HSP90B2PQ58FF3 399 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 RABL3Q5HYI8 236 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 REP15Q6BDI9 236 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 TMEM123Q8N131 208 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 FAM169BQ8N8A8 192 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 BCL2L2Q92843 193 aaPredicted RBP20.49■□□□□ 0.87
C9orf3-215ENST00000478473 ZNF583Q96ND8 569 aa20.49■□□□□ 0.87
C9orf3-215ENST00000478473 DHRS9Q9BPW9 319 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms