RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 RPRD1AQ96P16 312 aaPredicted RBP2.08□□□□□ -2.08
TARDBP-208ENST00000477447 NPAS2Q99743 824 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 TMEM246Q9BRR3 403 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 CLMPQ9H6B4 373 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 POLE4Q9NR33 117 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 MMP17Q9ULZ9 603 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 KCNIP3Q9Y2W7 256 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 MAP3K15Q6ZN16 1313 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 PHF3Q92576 2039 aaKnown RBP2.08□□□□□ -2.08
TARDBP-208ENST00000477447 RPAP1Q9BWH6 1393 aaPredicted RBP2.08□□□□□ -2.08
TARDBP-208ENST00000477447 LTBP1Q14766 1721 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 PDS5BQ9NTI5 1447 aa2.08□□□□□ -2.08
TARDBP-208ENST00000477447 KIR2DL5BA0A0G2JN68 375 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 KIR2DL5BA0A0G2JPC4 375 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 RSPH10B2B2RC85 870 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 C12orf77C9JDV5 145 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 ANKRD63C9JTQ0 380 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 PES1O00541 588 aaKnown RBP2.07□□□□□ -2.08
TARDBP-208ENST00000477447 ICOSLGO75144 302 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 RSPH10BP0C881 870 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 PNMA6AP0CW24 399 aaPredicted RBP2.07□□□□□ -2.08
TARDBP-208ENST00000477447 DBTP11182 482 aaKnown RBP2.07□□□□□ -2.08
TARDBP-208ENST00000477447 ADRB3P13945 408 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 BTCP35070 178 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 SLC26A3P40879 764 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 GRIA1P42261 906 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 CCT3P49368 545 aaKnown RBP2.07□□□□□ -2.08
TARDBP-208ENST00000477447 DUSP3P51452 185 aaPredicted RBP2.07□□□□□ -2.08
TARDBP-208ENST00000477447 CRYBB1P53674 252 aaPredicted RBP2.07□□□□□ -2.08
TARDBP-208ENST00000477447 ATP1B3P54709 279 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 PAX5Q02548 391 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 REG3AQ06141 175 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 OR5I1Q13606 314 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 PDK3Q15120 406 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 TAF7Q15545 349 aaPredicted RBP2.07□□□□□ -2.08
TARDBP-208ENST00000477447 EXOC3L2Q2M3D2 409 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 TSPO2Q5TGU0 170 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 PMF1Q6P1K2 205 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 C1orf94Q6P1W5 598 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 ZNF621Q6ZSS3 439 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 CAMK2N1Q7Z7J9 78 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 ECHDC2Q86YB7 292 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 KIR2DL5AQ8N109 375 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 FNDC5Q8NAU1 212 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 STEAP2Q8NFT2 490 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 KIR2DL5BQ8NHK3 375 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 DTX3LQ8TDB6 740 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 TM4SF19Q96DZ7 209 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 COQ2Q96H96 371 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 OXGR1Q96P68 337 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 MTMR9Q96QG7 549 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 COPS8Q99627 209 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 PELOQ9BRX2 385 aaKnown RBP2.07□□□□□ -2.08
TARDBP-208ENST00000477447 CAPS2Q9BXY5 557 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 PLA2G2FQ9BZM2 168 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 DEFB127Q9H1M4 99 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 GBA3Q9H227 469 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 PATZ1Q9HBE1 687 aaKnown RBP2.07□□□□□ -2.08
TARDBP-208ENST00000477447 GIN1Q9NXP7 522 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 SLC25A37Q9NYZ2 338 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 CLCF1Q9UBD9 225 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 GNPTGQ9UJJ9 305 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 CDH9Q9ULB4 789 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 HEBP2Q9Y5Z4 205 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 ARHGAP21Q5T5U3 1957 aa2.07□□□□□ -2.08
TARDBP-208ENST00000477447 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.06□□□□□ -2.08
TARDBP-208ENST00000477447 TRAV26-1A0A087WT03 109 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 C15orf38-AP3S2A0A0A6YYH1 394 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 OR5B21A6NL26 309 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 C12orf71A8MTZ7 269 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 LAD1O00515 517 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 HSD17B6O14756 317 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 NBR2O15453 112 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 ZNF208O43345 1280 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 SNAI2O43623 268 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 TOM1O60784 492 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 SNNO75324 88 aaPredicted RBP2.06□□□□□ -2.08
TARDBP-208ENST00000477447 ALDOBP05062 364 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 MAGEA8P43361 318 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 HERVK_113P61574 105 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 CDK16Q00536 496 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 NCBP1Q09161 790 aaKnown RBP2.06□□□□□ -2.08
TARDBP-208ENST00000477447 PDIA2Q13087 525 aaKnown RBP2.06□□□□□ -2.08
TARDBP-208ENST00000477447 MADCAM1Q13477 382 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 PTGES3Q15185 160 aaKnown RBP2.06□□□□□ -2.08
TARDBP-208ENST00000477447 RFX4Q33E94 735 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 PIGGQ5H8A4 983 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 KHDRBS2Q5VWX1 349 aaKnown RBP2.06□□□□□ -2.08
TARDBP-208ENST00000477447 OR52W1Q6IF63 320 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 FRMPD2BQ6IN97 320 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 ENPP6Q6UWR7 440 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 C6orf120Q7Z4R8 191 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 LINC01551Q86U37 167 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 OR52M1Q8NGK5 317 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 OR5D13Q8NGL4 314 aa2.06□□□□□ -2.08
TARDBP-208ENST00000477447 ACOT11Q8WXI4 607 aaPredicted RBP2.06□□□□□ -2.08
TARDBP-208ENST00000477447 TRIM44Q96DX7 344 aaPredicted RBP2.06□□□□□ -2.08
TARDBP-208ENST00000477447 ZNF641Q96N77 438 aaPredicted RBP2.06□□□□□ -2.08
TARDBP-208ENST00000477447 RIOK1Q9BRS2 568 aaKnown RBP2.06□□□□□ -2.08
TARDBP-208ENST00000477447 PARD6BQ9BYG5 372 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms