RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 PDLIM1O00151 329 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 AKAP8O43823 692 aaKnown RBP10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 TMCC2O75069 709 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 PDE5AO76074 875 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 AKR7A3O95154 331 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 LYPD3O95274 346 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 IL32P24001 234 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 RPS5P46782 204 aaKnown RBP10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 MS4A2Q01362 244 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 EXOC3L2Q2M3D2 409 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 BEX5Q5H9J7 111 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 TIMM23BQ5SRD1 257 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 TTC33Q6PID6 262 aaPredicted RBP10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 CREB3L2Q70SY1 520 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 CARM1Q86X55 608 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 ZIC4Q8N9L1 334 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 OR4D11Q8NGI4 311 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 LIPHQ8WWY8 451 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 GEMIN6Q8WXD5 167 aaKnown RBP10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 TAAR8Q969N4 342 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 UTP4Q969X6 686 aaKnown RBP10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 NSMCE2Q96MF7 247 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 WFDC6Q9BQY6 131 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 ASPNQ9BXN1 380 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 POLDIP3Q9BY77 421 aaKnown RBP10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 LINC00470Q9BZP3 86 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 ANKRD19PQ9H560 264 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 FKRPQ9H9S5 495 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 TAS2R16Q9NYV7 291 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 ZNF229Q9UJW7 825 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 POMPQ9Y244 141 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 NOX1Q9Y5S8 564 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 MPDZO75970 2070 aa10.93□□□□□ -0.66
CLCNKA-205ENST00000477360 ABCA4P78363 2273 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 POLQO75417 2590 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 AQP12BA6NM10 295 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 DEFB108AA8MXU0 73 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 RAMP1O60894 148 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 ADAP00813 363 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 BGLAPP02818 100 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 IFNW1P05000 195 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 HOXB1P14653 301 aaPredicted RBP10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 NCK1P16333 377 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 ZNF43P17038 809 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 HOXB6P17509 224 aaKnown RBP10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 KLK2P20151 261 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 GRPRP30550 384 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 MSX2P35548 267 aaPredicted RBP10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 SH3BGRP55822 239 aaPredicted RBP10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 ST3GAL3Q11203 375 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 ZP4Q12836 540 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 STK11Q15831 433 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 LRRC23Q53EV4 343 aaPredicted RBP10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 BHLHA15Q7RTS1 189 aaPredicted RBP10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 PXKQ7Z7A4 578 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 TMEM200AQ86VY9 491 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 CXorf67Q86X51 503 aaPredicted RBP10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 DHFR2Q86XF0 187 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 AQP12AQ8IXF9 295 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 ZNF433Q8N7K0 673 aaPredicted RBP10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 FAM162AQ96A26 154 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 LRR1Q96L50 414 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 PRRC1Q96M27 445 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 MUS81Q96NY9 551 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 SLCO5A1Q9H2Y9 848 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 OBP2BQ9NPH6 170 aa10.92□□□□□ -0.66
CLCNKA-205ENST00000477360 TCRBV5S2A0A599 114 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 NPIPB13A6NJU9 1138 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 OR5H1A6NKK0 313 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 CPSF4LA6NMK7 179 aaKnown RBP10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 NPIPB4C9JG80 1138 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 RPL36A-HNRNPH2H7BZ11 118 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 M0R082 166 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 STAMBPO95630 424 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 SERPINA1P01009 418 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 THY1P04216 161 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 ATP6V1B2P21281 511 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 MPGP29372 298 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 NTF4P34130 210 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 TAS2R41P59536 307 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 PUDPQ08623 228 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 ZNF74Q16587 644 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 ANKDD1AQ495B1 522 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 IFI44LQ53G44 452 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 CASP12Q6UXS9 341 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 AAED1Q7RTV5 226 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 GPAT4Q86UL3 456 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 CDH24Q86UP0 819 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 CDC20BQ86Y33 519 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 RBM45Q8IUH3 476 aaKnown RBP10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 EPHX4Q8IUS5 362 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 RNF113BQ8IZP6 322 aaKnown RBP10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 OFCC1Q8IZS5 231 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 OR5J2Q8NH18 312 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 ZNF417Q8TAU3 575 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 S100PBPQ96BU1 408 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 SLC25A36Q96CQ1 311 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 CCDC124Q96CT7 223 aaKnown RBP10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 MBD6Q96DN6 1003 aa10.91□□□□□ -0.66
CLCNKA-205ENST00000477360 MUCL1Q96DR8 90 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms