RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 CHST14Q8NCH0 376 aa14.01□□□□□ -0.17
CLSTN1-205ENST00000477264 OR4C6Q8NH72 309 aa14.01□□□□□ -0.17
CLSTN1-205ENST00000477264 GLYATL2Q8WU03 294 aa14.01□□□□□ -0.17
CLSTN1-205ENST00000477264 HMGB4Q8WW32 186 aa14.01□□□□□ -0.17
CLSTN1-205ENST00000477264 MYLIPQ8WY64 445 aa14.01□□□□□ -0.17
CLSTN1-205ENST00000477264 ZNF251Q9BRH9 671 aa14.01□□□□□ -0.17
CLSTN1-205ENST00000477264 APMAPQ9HDC9 416 aa14.01□□□□□ -0.17
CLSTN1-205ENST00000477264 ZFP57Q9NU63 452 aa14.01□□□□□ -0.17
CLSTN1-205ENST00000477264 MTFP1Q9UDX5 166 aa14.01□□□□□ -0.17
CLSTN1-205ENST00000477264 TRBV2A0A0J9YWF9 115 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 ACOD1A6NK06 481 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 LINC01387J3KSC0 135 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 FMO6PO60774 539 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 LILRB5O75023 590 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 CLEC3AO75596 197 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 RBBP9O75884 186 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 GLSO94925 669 aaPredicted RBP14□□□□□ -0.17
CLSTN1-205ENST00000477264 SLC25A4P12235 298 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 CDK2P24941 298 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 EDNRAP25101 427 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 SRSF4Q08170 494 aaKnown RBP14□□□□□ -0.17
CLSTN1-205ENST00000477264 MELKQ14680 651 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 IRF4Q15306 451 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 TP53I3Q53FA7 332 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 TMEM35AQ53FP2 167 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 DCAF12L2Q5VW00 463 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 PARM1Q6UWI2 310 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 TMPRSS11FQ6ZWK6 438 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 MTSS1LQ765P7 747 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 FGF14Q92915 247 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 CNN2Q99439 309 aaKnown RBP14□□□□□ -0.17
CLSTN1-205ENST00000477264 PLA2G2FQ9BZM2 168 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 SLITRK2Q9H156 845 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 C1orf198Q9H425 327 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 NOX4Q9NPH5 578 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 TMEM138Q9NPI0 162 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 A0A1W2PPK0 400 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 DUXAA6NLW8 204 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 GPR31O00270 319 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 RDH16O75452 317 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 PMS2P2O95744 297 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 RLN1P04808 185 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 THBS1P07996 1170 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 IL9P15248 144 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 GDI1P31150 447 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 LTBRP36941 435 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 C2orf68Q2NKX9 166 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 PAN3Q58A45 887 aaKnown RBP14□□□□□ -0.17
CLSTN1-205ENST00000477264 GLT8D1Q68CQ7 371 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 FAAP20Q6NZ36 180 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 SSX6Q7RTT6 188 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 FAM122BQ7Z309 247 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 UBE3DQ7Z6J8 389 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 OR4C16Q8NGL9 310 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 OR2A12Q8NGT7 310 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 TMEM239Q8WW34 195 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 PEX11GQ96HA9 241 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 MRGPRX3Q96LB0 322 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 GFI1Q99684 422 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 PRSS27Q9BQR3 290 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 TRMT61BQ9BVS5 477 aaKnown RBP14□□□□□ -0.17
CLSTN1-205ENST00000477264 ACTRT3Q9BYD9 372 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 ZNF768Q9H5H4 540 aaKnown RBP14□□□□□ -0.17
CLSTN1-205ENST00000477264 POLMQ9NP87 494 aaPredicted RBP14□□□□□ -0.17
CLSTN1-205ENST00000477264 OR5V1Q9UGF6 321 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 EDARQ9UNE0 448 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 NTNG1Q9Y2I2 539 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 KCNE3Q9Y6H6 103 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 MYO10Q9HD67 2058 aa14□□□□□ -0.17
CLSTN1-205ENST00000477264 TBC1D3EA0A087X179 549 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 TRAV14DV4A0A0A6YYC5 116 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 A0A1W2PPC1 479 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 TMEM82A0PJX8 343 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 S100A9P06702 114 aaKnown RBP13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 AKAIN1P0CW23 69 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 FOSL1P15407 271 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 CSNK2A2P19784 350 aaPredicted RBP13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 VASPP50552 380 aaPredicted RBP13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 SNTB1Q13884 538 aaKnown RBP13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 CRMP1Q14194 572 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 JMJD6Q6NYC1 403 aaPredicted RBP13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 OR2W3Q7Z3T1 314 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 TRAPPC5Q8IUR0 188 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 SERPINA12Q8IW75 414 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 LMNTD1Q8N9Z9 388 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 NUP43Q8NFH3 380 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 ARL5BQ96KC2 179 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 ZDHHC5Q9C0B5 715 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 MYOZ1Q9NP98 299 aaPredicted RBP13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 ANKRD10Q9NXR5 420 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 TAC3Q9UHF0 121 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 SIGLEC7Q9Y286 467 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 XIRP2A4UGR9 3374 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 NUP210LQ5VU65 1888 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 RPN2P04844 631 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 FABP1P07148 127 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 MAKP20794 623 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 GJA4P35212 333 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 GAB4Q2WGN9 574 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 PCGF3Q3KNV8 242 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms