RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 LSM7Q9UK45 103 aaKnown RBP3.46□□□□□ -1.86
VPS13D-207ENST00000476169 RARRES3Q9UL19 164 aa3.46□□□□□ -1.86
VPS13D-207ENST00000476169 RBMX2Q9Y388 322 aaKnown RBP3.46□□□□□ -1.86
VPS13D-207ENST00000476169 SH3TC1Q8TE82 1336 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 USP6P35125 1406 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 MAP3K4Q9Y6R4 1608 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 GOLGA8QA0A0J9YX86 632 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 OR5B21A6NL26 309 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 PP2D1A8MPX8 630 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 FAM72CH0Y354 149 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 SULT2B1O00204 365 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 HSD17B6O14756 317 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 UGT1A9O60656 530 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 NXPH4O95158 308 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 C1orf105O95561 183 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 IGLV2-11P01706 119 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 ALDOBP05062 364 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 PVRP15151 417 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 GATA1P15976 413 aaPredicted RBP3.45□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF3P17036 446 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 SLC2A5P22732 501 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 GABRR2P28476 465 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 IL12AP29459 219 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 RORAP35398 523 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 TIMP3P35625 211 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 SPAM1P38567 509 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 OPRD1P41143 372 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 GSSP48637 474 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 KPNA2P52292 529 aaKnown RBP3.45□□□□□ -1.86
VPS13D-207ENST00000476169 HMGCS2P54868 508 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 LIM2P55344 173 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 TMEM50BP56557 158 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 SRPXP78539 464 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 CYCSP99999 105 aaKnown RBP3.45□□□□□ -1.86
VPS13D-207ENST00000476169 GNMTQ14749 295 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 CCDC6Q16204 474 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 SLC22A6Q4U2R8 563 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 C14orf28Q4W4Y0 310 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 SAMD4BQ5PRF9 694 aaKnown RBP3.45□□□□□ -1.86
VPS13D-207ENST00000476169 FAM72AQ5TYM5 149 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 FAM72DQ6L9T8 149 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 C3P1Q6ZMU1 363 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 NDUFAF7Q7L592 441 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 FAM72BQ86X60 149 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 ZBED8Q8IZ13 594 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 MYOCDQ8IZQ8 938 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 METTL4Q8N3J2 472 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 EID2Q8N6I1 236 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF491Q8N8L2 437 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 FNDC5Q8NAU1 212 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF248Q8NDW4 579 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 CATSPER1Q8NEC5 780 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 FBXL13Q8NEE6 735 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 NUP37Q8NFH4 326 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 OR5B3Q8NH48 314 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 OR52E5Q8NH55 327 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 SLC7A13Q8TCU3 470 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 CRYGNQ8WXF5 182 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 NR4A3Q92570 626 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 ECHDC3Q96DC8 303 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 HSFY1Q96LI6 401 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 GLT1D1Q96MS3 346 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 NODALQ96S42 347 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 SYT11Q9BT88 431 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 KRTAP4-11Q9BYQ6 195 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 UCK2Q9BZX2 261 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 OR51M1Q9H341 326 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 PIGUQ9H490 435 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 RANBP3Q9H6Z4 567 aaPredicted RBP3.45□□□□□ -1.86
VPS13D-207ENST00000476169 EXOSC3Q9NQT5 275 aaKnown RBP3.45□□□□□ -1.86
VPS13D-207ENST00000476169 EHFQ9NZC4 300 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 TMEM181Q9P2C4 612 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 STOX2Q9P2F5 926 aaPredicted RBP3.45□□□□□ -1.86
VPS13D-207ENST00000476169 WRAP73Q9P2S5 460 aaPredicted RBP3.45□□□□□ -1.86
VPS13D-207ENST00000476169 UXTQ9UBK9 157 aaPredicted RBP3.45□□□□□ -1.86
VPS13D-207ENST00000476169 CTSFQ9UBX1 484 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 WARS2Q9UGM6 360 aaKnown RBP3.45□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF229Q9UJW7 825 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 RPL36Q9Y3U8 105 aaKnown RBP3.45□□□□□ -1.86
VPS13D-207ENST00000476169 CCDC18Q5T9S5 1454 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 LRRC9Q6ZRR7 1453 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 NEURL4Q96JN8 1562 aa3.45□□□□□ -1.86
VPS13D-207ENST00000476169 PTPRKQ15262 1439 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 ARHGAP5Q13017 1502 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 ABCA9Q8IUA7 1624 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 KCNE1BA0A087WTH5 132 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 IGHV3-38A0A0C4DH36 116 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 A0A1W2PRD5 423 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 BCLAF3A2AJT9 711 aaKnown RBP3.44□□□□□ -1.86
VPS13D-207ENST00000476169 ARHGEF33A8MVX0 844 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 E9PLD3 99 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 CHST1O43916 411 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 SOX15O60248 233 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 HCN1O60741 890 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF254O75437 659 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 SMC2O95347 1197 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 FARS2O95363 451 aaKnown RBP3.44□□□□□ -1.86
VPS13D-207ENST00000476169 SERPINB2P05120 415 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 CD55P08174 381 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 KRT16P08779 473 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms