RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 RCE1Q9Y256 329 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 PCDHB14Q9Y5E9 798 aa9.4□□□□□ -0.9
CDRT1-205ENST00000475944 LRP5LA4QPB2 252 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 TMEM247A6NEH6 219 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 TMEM229AB2RXF0 380 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 RGS16O15492 202 aaPredicted RBP9.39□□□□□ -0.91
CDRT1-205ENST00000475944 SLC43A1O75387 559 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 ANP32DO95626 131 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 PNMTP11086 282 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 ETFAP13804 333 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 CBR1P16152 277 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 BGNP21810 368 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 APEX1P27695 318 aaKnown RBP9.39□□□□□ -0.91
CDRT1-205ENST00000475944 IL12AP29459 219 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 ARR3P36575 388 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 SRP14P37108 136 aaKnown RBP9.39□□□□□ -0.91
CDRT1-205ENST00000475944 CRATP43155 626 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 CLDN17P56750 224 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 DSTNP60981 165 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 MAPK11Q15759 364 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 ATG16L1Q676U5 607 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 SPATA21Q7Z572 469 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 CCDC36Q8IYA8 594 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 GPR137CQ8N3F9 429 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 LINC01356Q8N9X3 169 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 IL17RDQ8NFM7 739 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 AENQ8WTP8 325 aaKnown RBP9.39□□□□□ -0.91
CDRT1-205ENST00000475944 HPS1Q92902 700 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 SLC25A36Q96CQ1 311 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 DOK1Q99704 481 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 SOX7Q9BT81 388 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 SPATA9Q9BWV2 254 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 SEC61A2Q9H9S3 476 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 THUMPD1Q9NXG2 353 aaKnown RBP9.39□□□□□ -0.91
CDRT1-205ENST00000475944 TMEFF2Q9UIK5 374 aaPredicted RBP9.39□□□□□ -0.91
CDRT1-205ENST00000475944 IFT52Q9Y366 437 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 GPR45Q9Y5Y3 372 aa9.39□□□□□ -0.91
CDRT1-205ENST00000475944 IGHV2OR16-5A0A0B4J2B6 119 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 A0A0G2JPF8 293 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 SH3PXD2BA1X283 911 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 HNRNPCL2B2RXH8 293 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 HNRNPCL3B7ZW38 293 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 SDHDO14521 159 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 AKAP8O43823 692 aaKnown RBP9.38□□□□□ -0.91
CDRT1-205ENST00000475944 HNRNPCL1O60812 293 aaKnown RBP9.38□□□□□ -0.91
CDRT1-205ENST00000475944 LILRA1O75019 489 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 IL6P05231 212 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 CELA3BP08861 270 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 ZCCHC18P0CG32 403 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 HNRNPCL4P0DMR1 293 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 PRG2P13727 222 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 PCMT1P22061 227 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 THBS4P35443 961 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 RPS5P46782 204 aaKnown RBP9.38□□□□□ -0.91
CDRT1-205ENST00000475944 MVDP53602 400 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 ARF1P84077 181 aaKnown RBP9.38□□□□□ -0.91
CDRT1-205ENST00000475944 HGFACQ04756 655 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 NPRL3Q12980 569 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 C1DQ13901 141 aaKnown RBP9.38□□□□□ -0.91
CDRT1-205ENST00000475944 ADRM1Q16186 407 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 C5orf46Q6UWT4 87 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 SERPINA11Q86U17 422 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 KDM8Q8N371 416 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 ZNF786Q8N393 782 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 CLIP4Q8N3C7 705 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 SVOPLQ8N434 492 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 PIK3C3Q8NEB9 887 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 UBASH3BQ8TF42 649 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 SLC38A5Q8WUX1 472 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 CKAP2Q8WWK9 683 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 SLC35B4Q969S0 331 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 TRIM44Q96DX7 344 aaPredicted RBP9.38□□□□□ -0.91
CDRT1-205ENST00000475944 OXGR1Q96P68 337 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 RMND5AQ9H871 391 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 TPT1P8Q9HAU6 139 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 PNPOQ9NVS9 261 aa9.38□□□□□ -0.91
CDRT1-205ENST00000475944 TMEM129A0AVI4 362 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 TRPC5OSA6NMA1 111 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 FTCDNL1E5RQL4 147 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 AIM2O14862 343 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 HDAC3O15379 428 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 OR2T1O43869 369 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 ZNF432O94892 652 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 IDO1P14902 403 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 IFNGR1P15260 489 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 EPHA3P29320 983 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 IL2RGP31785 369 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 CAPZA2P47755 286 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 CDH15P55291 814 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 POU3F1Q03052 451 aaPredicted RBP9.37□□□□□ -0.91
CDRT1-205ENST00000475944 BST1Q10588 318 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 SNTB2Q13425 540 aaKnown RBP9.37□□□□□ -0.91
CDRT1-205ENST00000475944 DAG1Q14118 895 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 CEACAM16Q2WEN9 425 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 ZNF311Q5JNZ3 666 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 RPS26P11Q5JNZ5 115 aaPredicted RBP9.37□□□□□ -0.91
CDRT1-205ENST00000475944 FAM69AQ5T7M9 428 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 MYPOPQ86VE0 399 aaPredicted RBP9.37□□□□□ -0.91
CDRT1-205ENST00000475944 ZCCHC24Q8N2G6 241 aaKnown RBP9.37□□□□□ -0.91
CDRT1-205ENST00000475944 TMEM19Q96HH6 336 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms