RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 TTLL8A6PVC2 850 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 KDM4EB2RXH2 506 aaPredicted RBP11.94□□□□□ -0.5
CCNL1-216ENST00000475298 LRRN3E7EW58 273 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 SYT5O00445 386 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 GSTZ1O43708 216 aaPredicted RBP11.94□□□□□ -0.5
CCNL1-216ENST00000475298 SERPINA3P01011 423 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 GSTM3P21266 225 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 GDNFP39905 211 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 TSPAN31Q12999 210 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 ZNF124Q15973 351 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 MANEAQ5SRI9 462 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 MFSD12Q6NUT3 480 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 PRSS41Q7RTY9 318 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 LINC00471Q8N535 108 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 BBS1Q8NFJ9 593 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 OR4D9Q8NGE8 314 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 OR6K3Q8NGY3 331 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 FLVCR1-AS1Q8TAF5 88 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 PATE1Q8WXA2 126 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 WNT2BQ93097 391 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 SCARF2Q96GP6 870 aaPredicted RBP11.94□□□□□ -0.5
CCNL1-216ENST00000475298 PEX11GQ96HA9 241 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 MCHR1Q99705 422 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 PDCD10Q9BUL8 212 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 GSDMCQ9BYG8 508 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 LRRN3Q9H3W5 708 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 ISG20L2Q9H9L3 353 aaKnown RBP11.94□□□□□ -0.5
CCNL1-216ENST00000475298 HRASLSQ9HDD0 168 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 RPH3AQ9Y2J0 694 aaPredicted RBP11.94□□□□□ -0.5
CCNL1-216ENST00000475298 FANCMQ8IYD8 2048 aa11.94□□□□□ -0.5
CCNL1-216ENST00000475298 FXYD6-FXYD2A0A087WZ82 144 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 CHST10O43529 356 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 S100A8P05109 93 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 FUT1P19526 365 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 S100PP25815 95 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 GPR143P51810 404 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 H2BFSP57053 126 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 ST3GAL3Q11203 375 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 SHHQ15465 462 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 DUSP5Q16690 384 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 C2orf68Q2NKX9 166 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 TRMT12Q53H54 448 aaKnown RBP11.93□□□□□ -0.5
CCNL1-216ENST00000475298 AVPI1Q5T686 147 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 HES5Q5TA89 166 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 ZNF626Q68DY1 528 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 MOB3CQ70IA8 216 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 GDF7Q7Z4P5 450 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 LRRC25Q8N386 305 aaPredicted RBP11.93□□□□□ -0.5
CCNL1-216ENST00000475298 KLHL36Q8N4N3 616 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 PHOSPHO1Q8TCT1 267 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 RXFP4Q8TDU9 374 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 THEM6Q8WUY1 208 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 ELSPBP1Q96BH3 223 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 FXYD6Q9H0Q3 95 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 SEBOXQ9HB31 216 aaPredicted RBP11.93□□□□□ -0.5
CCNL1-216ENST00000475298 DZANK1Q9NVP4 752 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 AKAP7Q9P0M2 348 aaPredicted RBP11.93□□□□□ -0.5
CCNL1-216ENST00000475298 ZNF443Q9Y2A4 671 aaPredicted RBP11.93□□□□□ -0.5
CCNL1-216ENST00000475298 HEBP2Q9Y5Z4 205 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 NPIPA5A0A0B4J1W7 369 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 NPIPA7E9PJI5 369 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 CDC42EP2O14613 210 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 EIF4E2O60573 245 aaKnown RBP11.93□□□□□ -0.5
CCNL1-216ENST00000475298 LDB3O75112 727 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 SLC35G6P0C7Q6 338 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 NPIPA8P0DM63 369 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 PRG2P13727 222 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 PVRP15151 417 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 ANXA7P20073 488 aaKnown RBP11.93□□□□□ -0.5
CCNL1-216ENST00000475298 PRKAR1BP31321 381 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 TSFMP43897 325 aaKnown RBP11.93□□□□□ -0.5
CCNL1-216ENST00000475298 NR0B1P51843 470 aaKnown RBP11.93□□□□□ -0.5
CCNL1-216ENST00000475298 RPS15AP62244 130 aaKnown RBP11.93□□□□□ -0.5
CCNL1-216ENST00000475298 PRAMEF8Q5VWM4 474 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 PRAMEF7Q5VXH5 474 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 OR7E24Q6IFN5 339 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 ZNF613Q6PF04 617 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 ZNF322Q6U7Q0 402 aaPredicted RBP11.93□□□□□ -0.5
CCNL1-216ENST00000475298 ZNF836Q6ZNA1 936 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 SVBPQ8N300 66 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 MEIOBQ8N635 442 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 FRMD1Q8N878 549 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 PIGXQ8TBF5 258 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 SMIM4Q8WVI0 70 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 HMGB4Q8WW32 186 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 FAM131CQ96AQ9 280 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 SLC41A3Q96GZ6 507 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 BMFQ96LC9 184 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 OR2A5Q96R48 311 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 ORAI3Q9BRQ5 295 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 C14orf105Q9NVL8 296 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 FBXO34Q9NWN3 711 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 SLC7A7Q9UM01 511 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 RCE1Q9Y256 329 aa11.93□□□□□ -0.5
CCNL1-216ENST00000475298 TMEM218A2RU14 115 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 IGHA1P01876 353 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 GP1BAP07359 652 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 PRF1P14222 555 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 SPI1P17947 270 aa11.92□□□□□ -0.5
CCNL1-216ENST00000475298 TNFRSF4P43489 277 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms