RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 TRAPPC4Q9Y296 219 aa8.53□□□□□ -1.04
DDX39B-217ENST00000474961 ATMQ13315 3056 aa8.53□□□□□ -1.04
DDX39B-217ENST00000474961 ARHGAP21Q5T5U3 1957 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 A0A1B0GTH9 108 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 H0YJX3 145 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 BLOC1S5-TXNDC5H3BN57 136 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 ZNHIT1O43257 154 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 RGS9O75916 674 aaPredicted RBP8.52□□□□□ -1.05
DDX39B-217ENST00000474961 AKR7A3O95154 331 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 RCBTB2O95199 551 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 SOX14O95416 240 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 CPN1P15169 458 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 ZNF708P17019 499 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 CDH2P19022 906 aaPredicted RBP8.52□□□□□ -1.05
DDX39B-217ENST00000474961 GTF2E2P29084 291 aaKnown RBP8.52□□□□□ -1.05
DDX39B-217ENST00000474961 POLR2IP36954 125 aaKnown RBP8.52□□□□□ -1.05
DDX39B-217ENST00000474961 EIF1AXP47813 144 aaKnown RBP8.52□□□□□ -1.05
DDX39B-217ENST00000474961 CRISP1P54107 249 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 CARD18P57730 90 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 NUP107P57740 925 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 FXYD6P3P58550 94 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 RAC3P60763 192 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 CSNK2A1P68400 391 aaPredicted RBP8.52□□□□□ -1.05
DDX39B-217ENST00000474961 HSF1Q00613 529 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 NPRL3Q12980 569 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 PMS2P3Q13401 168 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 C3AR1Q16581 482 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 KRTCAP3Q53RY4 240 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 PRR30Q53SZ7 412 aaPredicted RBP8.52□□□□□ -1.05
DDX39B-217ENST00000474961 PDSS1Q5T2R2 415 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 IZUMO2Q6UXV1 221 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 ZNF620Q6ZNG0 422 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 H1FNTQ75WM6 255 aaPredicted RBP8.52□□□□□ -1.05
DDX39B-217ENST00000474961 NANOGNBQ7Z5D8 188 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 PARP8Q8N3A8 854 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 OR5J2Q8NH18 312 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 OR10D3Q8NH80 312 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 FAR1Q8WVX9 515 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 SNRNP40Q96DI7 357 aaKnown RBP8.52□□□□□ -1.05
DDX39B-217ENST00000474961 WDYHV1Q96HA8 205 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 SAMD8Q96LT4 415 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 RDH12Q96NR8 316 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 MBOAT4Q96T53 435 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 GABARAPL3Q9BY60 117 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 SRXN1Q9BYN0 137 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 RIBC2Q9H4K1 309 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 EGLN3Q9H6Z9 239 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 MCCC2Q9HCC0 563 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 CHST11Q9NPF2 352 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 SMPD3Q9NY59 655 aaPredicted RBP8.52□□□□□ -1.05
DDX39B-217ENST00000474961 MRPL39Q9NYK5 338 aaKnown RBP8.52□□□□□ -1.05
DDX39B-217ENST00000474961 IL20Q9NYY1 176 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 SEC14L4Q9UDX3 406 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 CAMK2AQ9UQM7 478 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 CORINQ9Y5Q5 1042 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 CDH10Q9Y6N8 788 aa8.52□□□□□ -1.05
DDX39B-217ENST00000474961 MED12LQ86YW9 2145 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 ITPR1Q14643 2758 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 SHANK1Q9Y566 2161 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 NPIPA2E9PIF3 369 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 NPIPA3F8WFD2 350 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 MS4A18H0YCH9 400 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 H3BN98 237 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 PLPP3O14495 311 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 DNPH1O43598 174 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 CXCL13O43927 109 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 TSPAN19P0C672 248 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 KLK2P20151 261 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 POU1F1P28069 291 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 EPHA2P29317 976 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 UQCRC1P31930 480 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 AQP2P41181 271 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 P2RY4P51582 365 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 TDGF1P3P51864 188 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 AGFG1P52594 562 aaKnown RBP8.51□□□□□ -1.05
DDX39B-217ENST00000474961 RPS3AP61247 264 aaKnown RBP8.51□□□□□ -1.05
DDX39B-217ENST00000474961 ESRRGP62508 458 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 RPS4XP62701 263 aaKnown RBP8.51□□□□□ -1.05
DDX39B-217ENST00000474961 H3F3AP84243 136 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 SGCBQ16585 318 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 MS4A18Q3C1V0 323 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 ANKDD1AQ495B1 522 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 SLC36A3Q495N2 470 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 RPL13AP3Q6NVV1 102 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 ARHGAP11AQ6P4F7 1023 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 SMARCD3Q6STE5 483 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 FGD2Q7Z6J4 655 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 GHDCQ8N2G8 530 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 DHRSXQ8N5I4 330 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 CLDN22Q8N7P3 220 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 TMEM99Q8N816 258 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 SCAIQ8N9R8 606 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 OR8D4Q8NGM9 314 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 MOSPD2Q8NHP6 518 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 TEX47Q8TBZ9 253 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 FANK1Q8TC84 345 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 SARAFQ96BY9 339 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 ZHX1-C8orf76Q96EF9 292 aa8.51□□□□□ -1.05
DDX39B-217ENST00000474961 ZNF845Q96IR2 970 aaPredicted RBP8.51□□□□□ -1.05
DDX39B-217ENST00000474961 NAA11Q9BSU3 229 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms