RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 MCIDASD6RGH6 385 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 LINC01387J3KSC0 135 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 M0R129 80 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 M0R3G1 203 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 PLPP3O14495 311 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 GNB5O14775 395 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 DNPH1O43598 174 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 NME2P1O60361 137 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 SLC25A12O75746 678 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 AHSA1O95433 338 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 PMS2P2O95744 297 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 SP1P08047 785 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 DBTP11182 482 aaKnown RBP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 HK1P19367 917 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 IL11P20809 199 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 NME2P22392 152 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 SLC2A5P22732 501 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 HTR1FP30939 366 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 AQP2P41181 271 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 RPS5P46782 204 aaKnown RBP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 P2RY4P51582 365 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 GFRA1P56159 465 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 RAC1P63000 192 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 H3F3AP84243 136 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 MVKQ03426 396 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 RPL18Q07020 188 aaKnown RBP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 ITGADQ13349 1161 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 OR1C1Q15619 314 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 ALG10Q5BKT4 473 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 CLEC12AQ5QGZ9 265 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 ARMC4Q5T2S8 1044 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 GPR139Q6DWJ6 353 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 SPINK14Q6IE38 97 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 SLC25A25Q6KCM7 469 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 ARHGAP11AQ6P4F7 1023 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 IGFL3Q6UXB1 125 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 LSRQ86X29 649 aaPredicted RBP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 EXD3Q8N9H8 876 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 ZFP62Q8NB50 900 aaPredicted RBP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 NPEPL1Q8NDH3 523 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF540Q8NDQ6 660 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 OR5J2Q8NH18 312 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 MOSPD2Q8NHP6 518 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 RFKQ969G6 155 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 MIB2Q96AX9 1013 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF837Q96EG3 531 aaPredicted RBP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 ARL5BQ96KC2 179 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 LRR1Q96L50 414 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 IL4I1Q96RQ9 567 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 UBL7Q96S82 380 aaPredicted RBP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 SMAD5Q99717 465 aaKnown RBP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 ZNF649Q9BS31 505 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 OR11A1Q9GZK7 315 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 RBM38Q9H0Z9 239 aaKnown RBP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 ADNPQ9H2P0 1102 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 HINT3Q9NQE9 182 aaKnown RBP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 QPCTLQ9NXS2 382 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 ALKBH4Q9NXW9 302 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 NDUFA13Q9P0J0 144 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 KLHL21Q9UJP4 597 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 BOKQ9UMX3 212 aaPredicted RBP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 VDAC3Q9Y277 283 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 B3GALT5Q9Y2C3 310 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 EXOGQ9Y2C4 368 aaKnown RBP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 RPL36Q9Y3U8 105 aaKnown RBP5.95□□□□□ -1.46
ATG4A-207ENST00000474825 KCNMB2Q9Y691 235 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 AKAP13Q12802 2813 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 DMXL2Q8TDJ6 3036 aa5.95□□□□□ -1.46
ATG4A-207ENST00000474825 BSNQ9UPA5 3926 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 CPAMD8Q8IZJ3 1885 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 SMIM31A0A1B0GVY4 71 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 IRGMA1A4Y4 181 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 EIF4E1BA6NMX2 242 aaKnown RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 SNTNA6NMZ2 147 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 MS4A18H0YCH9 400 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 TAF4O00268 1085 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 SEC14L5O43304 696 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 RGS10O43665 173 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 AHCYL1O43865 530 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 GMFGO60234 142 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 FAM20BO75063 409 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 SEC14L2O76054 403 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 SLC2A10O95528 541 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 PPP1R3DO95685 299 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 IFNGP01579 166 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 ADRA2AP08913 450 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 RFPL3SP0C7P2 107 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 HIST1H1CP16403 213 aaKnown RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 PTNP21246 168 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 GRPRP30550 384 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 SDHAP31040 664 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 TTKP33981 857 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 MASP1P48740 699 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 DNASE1L1P49184 302 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 ST13P50502 369 aaKnown RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 TNFSF10P50591 281 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 AGFG1P52594 562 aaKnown RBP5.94□□□□□ -1.46
ATG4A-207ENST00000474825 SLC25A1P53007 311 aa5.94□□□□□ -1.46
ATG4A-207ENST00000474825 OC90Q02509 493 aaPredicted RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms