RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 REEP4Q9H6H4 257 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 MIEF1Q9NQG6 463 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 OR1A1Q9P1Q5 309 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 ONECUT1Q9UBC0 465 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 RABL2AQ9UBK7 228 aaPredicted RBP3.3□□□□□ -1.88
BRCA1-212ENST00000473961 DCDC2Q9UHG0 476 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 RIMS3Q9UJD0 308 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 RPL36Q9Y3U8 105 aaKnown RBP3.3□□□□□ -1.88
BRCA1-212ENST00000473961 BZW2Q9Y6E2 419 aaKnown RBP3.3□□□□□ -1.88
BRCA1-212ENST00000473961 TUBGCP6Q96RT7 1819 aa3.3□□□□□ -1.88
BRCA1-212ENST00000473961 ABCC3O15438 1527 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 KIF26BQ2KJY2 2108 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 IFT140Q96RY7 1462 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 CEMIPQ8WUJ3 1361 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 A0A075B6Q4 140 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 A0A1B0GWB2 263 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 H3BQV1 296 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 TRAPPC3O43617 180 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 PFDN1O60925 122 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 SLITRK3O94933 977 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 NCK1P16333 377 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 POLR2EP19388 210 aaKnown RBP3.29□□□□□ -1.88
BRCA1-212ENST00000473961 CD1CP29017 333 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 PRKAR2BP31323 418 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 CASP14P31944 242 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 RFC4P35249 363 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 CRYBB2P43320 205 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 HSPA2P54652 639 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 RPS8P62241 208 aaKnown RBP3.29□□□□□ -1.88
BRCA1-212ENST00000473961 ZFP36L1Q07352 338 aaKnown RBP3.29□□□□□ -1.88
BRCA1-212ENST00000473961 BST2Q10589 180 aaKnown RBP3.29□□□□□ -1.88
BRCA1-212ENST00000473961 ITIH4Q14624 930 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 TIMM50Q3ZCQ8 353 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 C14orf177Q52M58 125 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 TTMPQ5BVD1 217 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 DMRTC1Q5HYR2 192 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 MARC1Q5VT66 337 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 CARD17Q5XLA6 110 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 LRRC74BQ6ZQY2 392 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 NCCRP1Q6ZVX7 275 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-212ENST00000473961 IQCKQ8N0W5 287 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 SLC35F6Q8N357 371 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 MMGT1Q8N4V1 131 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 RAB3IL1Q8TBN0 382 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.29□□□□□ -1.88
BRCA1-212ENST00000473961 MCUR1Q96AQ8 359 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 ATP6V1G3Q96LB4 118 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 ZNF641Q96N77 438 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-212ENST00000473961 LLPHQ9BRT6 129 aaKnown RBP3.29□□□□□ -1.88
BRCA1-212ENST00000473961 TRIM62Q9BVG3 475 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 ILKAPQ9H0C8 392 aaPredicted RBP3.29□□□□□ -1.88
BRCA1-212ENST00000473961 RBKSQ9H477 322 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 NMRAL1Q9HBL8 299 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 NT5MQ9NPB1 228 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 KLHL28Q9NXS3 571 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 B3GNT2Q9NY97 397 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 ABCG2Q9UNQ0 655 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 PDE10AQ9Y233 779 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 PEX16Q9Y5Y5 336 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 SAR1BQ9Y6B6 198 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 KNDC1Q76NI1 1749 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 ZC3H13Q5T200 1668 aaKnown RBP3.29□□□□□ -1.88
BRCA1-212ENST00000473961 ABCA9Q8IUA7 1624 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 DUOX2Q9NRD8 1548 aa3.29□□□□□ -1.88
BRCA1-212ENST00000473961 CDK12Q9NYV4 1490 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-212ENST00000473961 OVOS2A0A0G2JMS6 1433 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 OVOS2A0A0J9YW53 1432 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 NPATQ14207 1427 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 OVOS2Q6IE36 1432 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 CD109Q6YHK3 1445 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 SBNO1A3KN83 1393 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 SETD1AO15047 1707 aaKnown RBP3.28□□□□□ -1.88
BRCA1-212ENST00000473961 IGHV7-81A0A0B4J1V7 117 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 A0A1B0GUS0 222 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 A0A1B0GVG6 124 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 SMCO3A2RU48 225 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 K7ENP7 123 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 WWP2O00308 870 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 PI15O43692 258 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 PAEPP09466 180 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 CLTAP09496 248 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 SLC35E2P0CK97 266 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 NQO1P15559 274 aaKnown RBP3.28□□□□□ -1.88
BRCA1-212ENST00000473961 VDAC1P21796 283 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 SHC1P29353 583 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 HTR1FP30939 366 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 PCK1P35558 622 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 SLC26A2P50443 739 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 TPMTP51580 245 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 PRMT2P55345 433 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 TLE4Q04727 773 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 SRSF5Q13243 272 aaKnown RBP3.28□□□□□ -1.88
BRCA1-212ENST00000473961 ITGB3BPQ13352 177 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-212ENST00000473961 TMEM52BQ4KMG9 183 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 PRAMEF20Q5VT98 475 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 FAM173BQ6P4H8 233 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 RNASEKQ6P5S7 137 aaKnown RBP3.28□□□□□ -1.88
BRCA1-212ENST00000473961 WDR74Q6RFH5 385 aaPredicted RBP3.28□□□□□ -1.88
BRCA1-212ENST00000473961 ENPP6Q6UWR7 440 aa3.28□□□□□ -1.88
BRCA1-212ENST00000473961 TMEM107Q6UX40 140 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms