RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 SLC25A36Q96CQ1 311 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 SLC41A3Q96GZ6 507 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 PYURFQ96I23 114 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 RSRC1Q96IZ7 334 aaKnown RBP11.62□□□□□ -0.55
TPM3-216ENST00000473036 TMUB1Q9BVT8 246 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 CXXC4Q9H2H0 198 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 GP6Q9HCN6 339 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 MEPEQ9NQ76 525 aaPredicted RBP11.62□□□□□ -0.55
TPM3-216ENST00000473036 CRIM1Q9NZV1 1036 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 KLHL9Q9P2J3 617 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 B3GAT1Q9P2W7 334 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 KCNN3Q9UGI6 736 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 RIMS3Q9UJD0 308 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 EMC9Q9Y3B6 208 aa11.62□□□□□ -0.55
TPM3-216ENST00000473036 TRAV36DV7A0A075B6V5 113 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 HPRP00739 348 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 SEMG1P04279 462 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 FCGR1AP12314 374 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 GRPRP30550 384 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 ART1P52961 327 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 UGT2B15P54855 530 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 FOXG1P55316 489 aaPredicted RBP11.61□□□□□ -0.55
TPM3-216ENST00000473036 CTBP2P56545 445 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 MS4A2Q01362 244 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 TSC22D1Q15714 1073 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 EXOC3L2Q2M3D2 409 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 TMEM201Q5SNT2 666 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 OTUD3Q5T2D3 398 aaPredicted RBP11.61□□□□□ -0.55
TPM3-216ENST00000473036 SWT1Q5T5J6 900 aaKnown RBP11.61□□□□□ -0.55
TPM3-216ENST00000473036 EEF1A1P5Q5VTE0 462 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 GTF2IRD2BQ6EKJ0 949 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 GTF2IRD2Q86UP8 949 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 EPHX4Q8IUS5 362 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 GABRG1Q8N1C3 465 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 RNF217Q8TC41 542 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 TMEM255BQ8WV15 326 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 GEMIN6Q8WXD5 167 aaKnown RBP11.61□□□□□ -0.55
TPM3-216ENST00000473036 DUS3LQ96G46 650 aaKnown RBP11.61□□□□□ -0.55
TPM3-216ENST00000473036 C7orf34Q96L11 122 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 ZNF385AQ96PM9 386 aaKnown RBP11.61□□□□□ -0.55
TPM3-216ENST00000473036 FOXC2Q99958 501 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 TMEM43Q9BTV4 400 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 POLR2J2Q9GZM3 115 aaKnown RBP11.61□□□□□ -0.55
TPM3-216ENST00000473036 POLR2J3Q9H1A7 115 aaKnown RBP11.61□□□□□ -0.55
TPM3-216ENST00000473036 RHCGQ9UBD6 479 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 EDARQ9UNE0 448 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 FLVCR1Q9Y5Y0 555 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 AKAP6Q13023 2319 aa11.61□□□□□ -0.55
TPM3-216ENST00000473036 TCRBV3S1A0A5B6 114 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 DHRS12A0PJE2 317 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 MS4A18H0YCH9 400 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 M0R082 166 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 EIF1BO60739 113 aaKnown RBP11.6□□□□□ -0.55
TPM3-216ENST00000473036 OR5F1O95221 314 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 AHSA1O95433 338 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 RAP2AP10114 183 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 ATP6V1B2P21281 511 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 UGT2B10P36537 528 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 CD79BP40259 229 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 OR3A2P47893 321 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 FOXD4Q12950 439 aaPredicted RBP11.6□□□□□ -0.55
TPM3-216ENST00000473036 GK3PQ14409 553 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 MS4A18Q3C1V0 323 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 IFI44LQ53G44 452 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 FAM69AQ5T7M9 428 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 CYP2R1Q6VVX0 501 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 STAC2Q6ZMT1 411 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 SLC46A3Q7Z3Q1 461 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 CYP4Z1Q86W10 505 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 LRRC17Q8N6Y2 441 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 OR9K2Q8NGE7 335 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 PFN4Q8NHR9 129 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 ZNF417Q8TAU3 575 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 PIGXQ8TBF5 258 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 ZNF347Q96SE7 839 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 ZNF587Q96SQ5 575 aaPredicted RBP11.6□□□□□ -0.55
TPM3-216ENST00000473036 C20orf141Q9NUB4 165 aa11.6□□□□□ -0.55
TPM3-216ENST00000473036 FAM32AQ9Y421 112 aaKnown RBP11.6□□□□□ -0.55
TPM3-216ENST00000473036 FBN3Q75N90 2809 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 KPNA4O00629 521 aaPredicted RBP11.59□□□□□ -0.55
TPM3-216ENST00000473036 SIAH2O43255 324 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 PIP5K1CO60331 668 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 DIRAS1O95057 198 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 IGHV3-9P01782 118 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 IFNW1P05000 195 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 THBDP07204 575 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 HLA-DOBP13765 273 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 FOSL1P15407 271 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 HOXB4P17483 251 aaPredicted RBP11.59□□□□□ -0.55
TPM3-216ENST00000473036 SMIM11AP58511 58 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 TAS2R41P59536 307 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 VLDLRP98155 873 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 SORDQ00796 357 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 LGALS3BPQ08380 585 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 KPNB1Q14974 876 aaKnown RBP11.59□□□□□ -0.55
TPM3-216ENST00000473036 ZNF74Q16587 644 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 ANKRD34AQ69YU3 496 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 CREB3L2Q70SY1 520 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 GALNT5Q7Z7M9 940 aa11.59□□□□□ -0.55
TPM3-216ENST00000473036 MEX3DQ86XN8 651 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms