RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 OSTF1Q92882 214 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 APH1AQ96BI3 265 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 CHMP6Q96FZ7 201 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 ARL5BQ96KC2 179 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 TMEM237Q96Q45 408 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 HBEGFQ99075 208 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 INPP5KQ9BT40 448 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 CACNG6Q9BXT2 260 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 EBPLQ9BY08 206 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 GLIPR2Q9H4G4 154 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 REEP4Q9H6H4 257 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 TMEM185BQ9H7F4 350 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 EML4Q9HC35 981 aaKnown RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 MID1IP1Q9NPA3 183 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 EQTNQ9NQ60 294 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 FARSBQ9NSD9 589 aaKnown RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 ZCCHC3Q9NUD5 404 aaKnown RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 EXD2Q9NVH0 621 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 C1orf109Q9NX04 203 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 PSMC3IPQ9P2W1 217 aaPredicted RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 MALT1Q9UDY8 824 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 DCDC2Q9UHG0 476 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 NDRG4Q9ULP0 352 aaKnown RBP3.08□□□□□ -1.92
XRN1-209ENST00000472625 CLEC4AQ9UMR7 237 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 SLC35A3Q9Y2D2 325 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 SLC9A8Q9Y2E8 581 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 AMDHD2Q9Y303 409 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 ARHGAP21Q5T5U3 1957 aa3.08□□□□□ -1.92
XRN1-209ENST00000472625 ARID1AO14497 2285 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 IGKV3D-15A0A087WSY6 115 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 A0A0J9YW62 118 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 LOC390937A0A1W2PQ73 354 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 DNAJC9-AS1A6NH13 148 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 CCT8L1PA6NM43 557 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 POC1B-GALNT4F8VUJ3 575 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 SLCO1B7G3V0H7 640 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 H0YC42 278 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 H0YIZ8 118 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 SULT2B1O00204 365 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 ZNF195O14628 629 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 ZNF264O43296 627 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 TCF21O43680 179 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 SSX4O60224 188 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 LMX1BO60663 402 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 CYTIPO60759 359 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 SEC22BO75396 215 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 STX11O75558 287 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 LYZL6O75951 148 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 KCNK2O95069 426 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 PGM3O95394 542 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 ADAP00813 363 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 CRYAAP02489 173 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 GUSBP08236 651 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 IL6RP08887 468 aaPredicted RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 APEHP13798 732 aaKnown RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 PGCP20142 388 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 PSMA4P25789 261 aaKnown RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 APOBEC1P41238 236 aaKnown RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 FRKP42685 505 aaPredicted RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 SLC1A3P43003 542 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 MAGEA8P43361 318 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 PDLIM4P50479 330 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 CCR4P51679 360 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 PRKAG1P54619 331 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 ATP12AP54707 1039 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 TPD52P55327 224 aaPredicted RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 SH3BGRP55822 239 aaPredicted RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 LOXL3P58215 753 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 DNAJB13P59910 316 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 KRTAP10-11P60412 298 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 RAE1P78406 368 aaKnown RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 ZNF117Q03924 483 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 C2orf54Q08AI8 447 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 RASGEF1BQ0VAM2 473 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 FOXF1Q12946 379 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 MAD2L1Q13257 205 aaPredicted RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 PDE7AQ13946 482 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 WHAMMP3Q1A5X7 153 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 PGGHGQ32M88 737 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 TMEM176BQ3YBM2 270 aaPredicted RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 FAM153CQ494X1 144 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 SYT14P1Q58G82 188 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 SLC25A53Q5H9E4 307 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 DCST2Q5T1A1 773 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 ATAD3BQ5T9A4 648 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 FBXW9Q5XUX1 488 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 REP15Q6BDI9 236 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 ABLIM2Q6H8Q1 611 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 NOXRED1Q6NXP6 359 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 FAM180BQ6P0A1 224 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 CDC73Q6P1J9 531 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 PLXDC2Q6UX71 529 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 ZNF788Q6ZQV5 615 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 Q6ZSR9 355 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 TRMT10CQ7L0Y3 403 aaKnown RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 EIF3MQ7L2H7 374 aaKnown RBP3.07□□□□□ -1.92
XRN1-209ENST00000472625 TUSC5Q8IXB3 177 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 CEP112Q8N8E3 955 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 CCDC63Q8NA47 563 aa3.07□□□□□ -1.92
XRN1-209ENST00000472625 POMGNT2Q8NAT1 580 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms